RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 STX4Q12846 297 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 ACAP2Q15057 778 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 TERF2Q15554 542 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 AP5B1Q2VPB7 878 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 PRAMEF9Q5VWM5 478 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 HIST2H2BCQ6DN03 193 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 SPINK14Q6IE38 97 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 CHSY3Q70JA7 882 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 MAMDC2Q7Z304 686 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 FJX1Q86VR8 437 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 SCUBE1Q8IWY4 988 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 NOA1Q8NC60 698 aaKnown RBP18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 MDS2Q8NDY4 140 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 THAP3Q8WTV1 239 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 TMEM125Q96AQ2 219 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 VMP1Q96GC9 406 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 QRFPRQ96P65 431 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 CSF3RQ99062 836 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 NPAS2Q99743 824 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 HES7Q9BYE0 225 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 ACTR8Q9H981 624 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 ADAP2Q9NPF8 381 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 DAPP1Q9UN19 280 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 CCDC189A1A4V9 331 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 SLC25A12O75746 678 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 KLHL2O95198 593 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 EPORP19235 508 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 CYB561P49447 251 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 ALDH18A1P54886 795 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 SRSF11Q05519 484 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 SETDB1Q15047 1291 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 MAPKAPK3Q16644 382 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 TMEM35AQ53FP2 167 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 C1QL3Q5VWW1 255 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF324BQ6AW86 544 aaPredicted RBP18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 GRHL2Q6ISB3 625 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 REPS1Q96D71 796 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 CMTM7Q96FZ5 175 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 TBCDQ9BTW9 1192 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 MS4A8Q9BY19 250 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 PCDHGB6Q9Y5F9 930 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 CLCA3PQ9Y6N3 262 aa18.56■□□□□ 0.56
SHROOM1-204ENST00000440118 MYO7BQ6PIF6 2116 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 TRGV8A0A0C4DH27 118 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 SAP18O00422 153 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 TGFB1P01137 390 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 PPP2R1BP30154 601 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 CASP2P42575 452 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 PIK3CGP48736 1102 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 HNRNPFP52597 415 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 CASP6P55212 293 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 ALDH6A1Q02252 535 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 NAA30Q147X3 362 aaPredicted RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 GALNTL5Q7Z4T8 443 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF473Q8WTR7 871 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 NCLNQ969V3 563 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 MAGED4Q96JG8 741 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 SCYL1Q96KG9 808 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 LYRM4Q9HD34 91 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 SUCOQ9UBS9 1254 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 ADGRE2Q9UHX3 823 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 DMGDHQ9UI17 866 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 SH3BGRL2Q9UJC5 107 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 TNPO3Q9Y5L0 923 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 CROCCQ5TZA2 2017 aa18.55■□□□□ 0.56
SHROOM1-204ENST00000440118 POC1B-GALNT4F8VUJ3 575 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 RTCAO00442 366 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 KRT38O76015 456 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TBX6O95947 436 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 ALDOAP04075 364 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TUBB4AP04350 444 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 SP1P08047 785 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TNNI3P19429 210 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 MST1P26927 711 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 SERPINB9P50453 376 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 MLF1P58340 268 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 ELAVL1Q15717 326 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 GLE1Q53GS7 698 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 SLC25A25Q6KCM7 469 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 RELL1Q8IUW5 271 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 LAS2Q8IYD9 372 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TMEM132CQ8N3T6 1108 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TMEM156Q8N614 296 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 ACOT4Q8N9L9 421 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TMEM52Q8NDY8 209 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 NFAM1Q8NET5 270 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 OR7G3Q8NG95 312 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 ATP6V1E2Q96A05 226 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 SCMH1Q96GD3 660 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 PAFAH2Q99487 392 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 TSPAN10Q9H1Z9 355 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 PRDM7Q9NQW5 492 aa18.54■□□□□ 0.56
SHROOM1-204ENST00000440118 HMX2A2RU54 273 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 CDK2AP1O14519 115 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 STSP08842 583 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 MTHFD2P13995 350 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 HIST1H1TP22492 207 aaPredicted RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 CPN2P22792 545 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 ATP5A1P25705 553 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 GTF2H2Q13888 395 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms