RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PTBP2Q9UKA9 531 aaKnown RBP17.22■□□□□ 0.35
AC004540.1-201ENST00000439120 CLCA3PQ9Y6N3 262 aa17.22■□□□□ 0.35
AC004540.1-201ENST00000439120 SPACA6W5XKT8 324 aa17.22■□□□□ 0.35
AC004540.1-201ENST00000439120 ENO4A6NNW6 628 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 KLRC4-KLRK1H3BQV0 150 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 TFECO14948 347 aaPredicted RBP17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 ITGA10O75578 1167 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 FAM155BO75949 473 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 PCNAP12004 261 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 CRABP2P29373 138 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 MSH2P43246 934 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 HNRNPFP52597 415 aaKnown RBP17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 LIM2P55344 173 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 STX4Q12846 297 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 NAB1Q13506 487 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 EFTUD2Q15029 972 aaKnown RBP eCLIP17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 ADNP2Q6IQ32 1131 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 XKRXQ6PP77 449 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 BNC2Q6ZN30 1099 aaPredicted RBP17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 VN1R5Q7Z5H4 357 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 CMC1Q7Z7K0 106 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 TICAM1Q8IUC6 712 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 ARMC10Q8N2F6 343 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 TMEM132CQ8N3T6 1108 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 FBXO25Q8TCJ0 367 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 FBF1Q8TES7 1133 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 CHST11Q9NPF2 352 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 OPTCQ9UBM4 332 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 ZNF490Q9ULM2 529 aaPredicted RBP17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 DAPP1Q9UN19 280 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 ERVK-11Q9UQG0 969 aa17.21■□□□□ 0.35
AC004540.1-201ENST00000439120 PRAMEF4O60810 478 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 ZFAND5O76080 213 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 LTA4HP09960 611 aaKnown RBP17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 HTR1EP28566 365 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 MEOX1P50221 254 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 SSR4P51571 173 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 ELAVL1Q15717 326 aaKnown RBP17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 TBCCQ15814 346 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 PRAMEF9Q5VWM5 478 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 MED27Q6P2C8 311 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 SYT10Q6XYQ8 523 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 Q6ZPB1 254 aaPredicted RBP17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 SIAH3Q8IW03 269 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 EID3Q8N140 333 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 TMEM52Q8NDY8 209 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 DAZLQ92904 295 aaKnown RBP17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 CSF3RQ99062 836 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 TBCDQ9BTW9 1192 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 TIMMDC1Q9NPL8 285 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 ZNF835Q9Y2P0 537 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 YARS2Q9Y2Z4 477 aaKnown RBP17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 ANGPTL3Q9Y5C1 460 aa17.2■□□□□ 0.34
AC004540.1-201ENST00000439120 ITPR2Q14571 2701 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 SYCE1LA8MT33 242 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 TGFBR3LH3BV60 316 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 CYR61O00622 381 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 PRRG2O14669 202 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 CTNSO60931 367 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 KERAO60938 352 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 TBX6O95947 436 aaPredicted RBP17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 TNNI3P19429 210 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 CD22P20273 847 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 SERPINB1P30740 379 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 ETF1P62495 437 aaKnown RBP17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 HSF1Q00613 529 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 AP5B1Q2VPB7 878 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 TMEM35AQ53FP2 167 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 ZNF227Q86WZ6 799 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 SULF2Q8IWU5 870 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 MCEMP1Q8IX19 187 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 SRRM1Q8IYB3 904 aaKnown RBP17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 LYRM4Q9HD34 91 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 PPIEQ9UNP9 301 aaKnown RBP17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 ACOT9Q9Y305 439 aa17.19■□□□□ 0.34
AC004540.1-201ENST00000439120 A8MVJ9 347 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 K7EPI3 171 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 UBXN8O00124 270 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 PEX1O43933 1283 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 SH3BGRLO75368 114 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 C1QAP02745 245 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 COX6B1P14854 86 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 EPB42P16452 691 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 GRNP28799 593 aaKnown RBP17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 GMPRP36959 345 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 RFC3P40938 356 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 SSR2P43308 183 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 ADORA2A-AS1P86434 159 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 SERTAD2Q14140 314 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 FAM83EQ2M2I3 478 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 RNFT1Q5M7Z0 435 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 HSDL2Q6YN16 418 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 ISCA2Q86U28 154 aa17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 MYLK4Q86YV6 388 aaPredicted RBP17.18■□□□□ 0.34
AC004540.1-201ENST00000439120 MORN4Q8NDC4 146 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms