RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 GKP32189 559 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 CD70P32970 193 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 SOX6P35712 828 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 EIF2DP41214 584 aaKnown RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 HMGA2P52926 109 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 DEFA1P59665 94 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 DEFA3P59666 94 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 NCS1P62166 190 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 SLC14A1Q13336 389 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 DGCR6Q14129 220 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 TIGD6Q17RP2 521 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ZXDCQ2QGD7 858 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF284Q2VY69 593 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 CRB2Q5IJ48 1285 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 TXNDC8Q6A555 127 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ANKRD54Q6NXT1 300 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 GDPGP1Q6ZNW5 385 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PRR23CQ6ZRP0 262 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 IKBIPQ70UQ0 350 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 VTCN1Q7Z7D3 282 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 NLRP8Q86W28 1048 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 TRIM69Q86WT6 500 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 NRSN1Q8IZ57 195 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 STX19Q8N4C7 294 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 OR4A15Q8NGL6 344 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 OR4C15Q8NGM1 316 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 APH1BQ8WW43 257 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 GEMIN6Q8WXD5 167 aaKnown RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PIK3R3Q92569 461 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 SH3KBP1Q96B97 665 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PYCR2Q96C36 320 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LRIG1Q96JA1 1093 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 CCM2Q9BSQ5 444 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 EBPLQ9BY08 206 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ATG10Q9H0Y0 220 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 MOV10Q9HCE1 1003 aaKnown RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF334Q9HCZ1 680 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 PCDH12Q9NPG4 1184 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 STOX2Q9P2F5 926 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 FBXO10Q9UK96 956 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 ANGPT4Q9Y264 503 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 FAM32AQ9Y421 112 aaKnown RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 LYVE1Q9Y5Y7 322 aa8.34□□□□□ -1.07
GABPB1-205ENST00000429662 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-205ENST00000429662 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 SLC5A10A0PJK1 596 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ARHGEF33A8MVX0 844 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 A8MX80 341 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 E7EQ34 232 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PSMD11O00231 422 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 TOR1BO14657 336 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PCDH7O60245 1069 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PRAMEF4O60810 478 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 COQ9O75208 318 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 TNFRSF21O75509 655 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 FGF19O95750 216 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 APOA1P02647 267 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PIPP12273 146 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-205ENST00000429662 DDX6P26196 483 aaKnown RBP eCLIP8.33□□□□□ -1.086e-6■■■■□ 19.3
GABPB1-205ENST00000429662 GABRR2P28476 465 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ETV6P41212 452 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PRIM2P49643 509 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PRLHRP49683 370 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ERVFC1P60507 584 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CDC42P60953 191 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 LSM3P62310 102 aaKnown RBP8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF763Q0D2J5 394 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 NAE1Q13564 534 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PDE7AQ13946 482 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 SCARB2Q14108 478 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 IRF3Q14653 427 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 SPOUT1Q5T280 376 aaKnown RBP8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PRAMEF9Q5VWM5 478 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 LAIR1Q6GTX8 287 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 VRK3Q8IV63 474 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 BBS7Q8IWZ6 715 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CLECL1Q8IZS7 167 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 C1orf52Q8N6N3 182 aaKnown RBP8.33□□□□□ -1.08
GABPB1-205ENST00000429662 OR7G3Q8NG95 312 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 OR10Q1Q8NGQ4 319 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PSMA8Q8TAA3 256 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF675Q8TD23 568 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 BTN2A2Q8WVV5 523 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 GGHQ92820 318 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 DNASE1L2Q92874 299 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 Q96MT0 163 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 SLC22A12Q96S37 553 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PIP5K1AQ99755 562 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 HEPHQ9BQS7 1158 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CDCA4Q9BXL8 241 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 ZDHHC6Q9H6R6 413 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 MYNNQ9NPC7 610 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CLN6Q9NWW5 311 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms