RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 FAM193BQ96PV7 902 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SLC38A2Q96QD8 506 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SEC22CQ9BRL7 303 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 C1QTNF6Q9BXI9 259 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 FTSJ1Q9UET6 329 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 PFDN2Q9UHV9 154 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 ZNF214Q9UL59 606 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SLC6A14Q9UN76 642 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 KCNK7Q9Y2U2 307 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 PHIPQ8WWQ0 1821 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 PQLC2LA1A4F0 135 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 HPGDSO60760 199 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MMP2P08253 660 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MAPKAPK2P49137 400 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SNRPGP62308 76 aaKnown RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 CSTF1Q05048 431 aaKnown RBP15.42■□□□□ 0.06
C9orf3-206ENST00000428313 C2orf80Q0P641 193 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 DSG2Q14126 1118 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 TSC22D1Q15714 1073 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 CYP27C1Q4G0S4 372 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SPIN4Q56A73 249 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 FBXO47Q5MNV8 452 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 TMEM201Q5SNT2 666 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 FRMPD2BQ6IN97 320 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MSANTD2Q6P1R3 559 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 LAS2Q8IYD9 372 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 FAM46DQ8NEK8 389 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 SLC22A8Q8TCC7 542 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 TRAPPC12Q8WVT3 735 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 NELL1Q92832 810 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 MALT1Q9UDY8 824 aa15.42■□□□□ 0.06
C9orf3-206ENST00000428313 CLIC1O00299 241 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 SNAPC5O75971 98 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 APOL3O95236 402 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 RPL35P42766 123 aaKnown RBP15.41■□□□□ 0.06
C9orf3-206ENST00000428313 PAQR9Q6ZVX9 377 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 HSD17B13Q7Z5P4 300 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-206ENST00000428313 TSEN54Q7Z6J9 526 aaKnown RBP15.41■□□□□ 0.06
C9orf3-206ENST00000428313 ANKRD46Q86W74 232 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 SYNPOQ8N3V7 929 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 OR52P1PQ8NH57 321 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 FATE1Q969F0 183 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 INTS12Q96CB8 462 aaKnown RBP15.41■□□□□ 0.06
C9orf3-206ENST00000428313 DOHHQ9BU89 302 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 IPPKQ9H8X2 491 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 DLL4Q9NR61 685 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 KCTD5Q9NXV2 234 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 NDUFAF4Q9P032 175 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 POMT2Q9UKY4 750 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 CLDN5O00501 218 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 SIGLEC6O43699 453 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 ENTPD6O75354 484 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 SULT1A3P0DMM9 295 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 SULT1A4P0DMN0 295 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 ENGP17813 658 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 CXCL3P19876 107 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 BDKRB1P46663 353 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 RENBPP51606 427 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 AKR1D1P51857 326 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 IL2P60568 153 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 TEAD4Q15561 434 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 PLK5Q496M5 336 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 PABPC1L2AQ5JQF8 200 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 MZT2AQ6P582 158 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 EIF4E3Q8N5X7 224 aaKnown RBP15.41■□□□□ 0.06
C9orf3-206ENST00000428313 TADA1Q96BN2 335 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 LINGO1Q96FE5 620 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 HHIPQ96QV1 700 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 H2AFJQ9BTM1 129 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 NUBP2Q9Y5Y2 271 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 NPTNQ9Y639 398 aa15.41■□□□□ 0.06
C9orf3-206ENST00000428313 COL4A4P53420 1690 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 PIPSLA2A3N6 862 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 F8W810 466 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 SLC19A2O60779 497 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 OLFM2O95897 454 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 PEX11BO96011 259 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 FCER2P06734 321 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 PRPS2P11908 318 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 POU1F1P28069 291 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 MEOX2P50222 304 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 HMGCS1Q01581 520 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 CRYZQ08257 329 aaKnown RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 LRRC32Q14392 662 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 EXOC3L2Q2M3D2 409 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 QSOX2Q6ZRP7 698 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 BVESQ8NE79 360 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 FDXACB1Q9BRP7 624 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 AGO3Q9H9G7 860 aaKnown RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 GPRC5BQ9NZH0 403 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 HCN2Q9UL51 889 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 GSTK1Q9Y2Q3 226 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 RPL36Q9Y3U8 105 aaKnown RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 AIPO00170 330 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 ULK1O75385 1050 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 MMP12P39900 470 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 MANEALQ5VSG8 457 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms