RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TNPO3Q9Y5L0 923 aaKnown RBP12.78□□□□□ -0.36
SNX3-204ENST00000426155 H0YIV9 168 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 PLPP1O14494 284 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 KLHL41O60662 606 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 HSD17B3P37058 310 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 CCNG1P51959 295 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 ACTN3Q08043 901 aaPredicted RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 L3MBTL4Q8NA19 623 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 DNAJB14Q8TBM8 379 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 ZNF483Q8TF39 744 aaPredicted RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 MTFMTQ96DP5 389 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 TMEM237Q96Q45 408 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 LPAR4Q99677 370 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 C12orf65Q9H3J6 166 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 CLK4Q9HAZ1 481 aaKnown RBP12.77□□□□□ -0.37
SNX3-204ENST00000426155 PRTFDC1Q9NRG1 225 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 FBXW2Q9UKT8 454 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 EMCNQ9ULC0 261 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 TMCO1Q9UM00 188 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
SNX3-204ENST00000426155 A0A088AWK7 358 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 SAGE2PA6NJ88 616 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 CYR61O00622 381 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 DLX3O60479 287 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 UGDHO60701 494 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 CLDN9O95484 217 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 WDPCPO95876 746 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 HIST1H1TP22492 207 aaPredicted RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 HPDP32754 393 aaPredicted RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 ARG2P78540 354 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 ID2Q02363 134 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 KCNC4Q03721 635 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 TGM3Q08188 693 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 DEPDC1Q5TB30 811 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 LETMD1Q6P1Q0 360 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 CRLF3Q8IUI8 442 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 IQCKQ8N0W5 287 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 OR4F6Q8NGB9 312 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 CCDC77Q9BR77 488 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 ZNF717Q9BY31 904 aaPredicted RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 KCNK13Q9HB14 408 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 FARSBQ9NSD9 589 aaKnown RBP12.76□□□□□ -0.37
SNX3-204ENST00000426155 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 KCMF1Q9P0J7 381 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 ZNF225Q9UK10 706 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 PCDHGA11Q9Y5H2 935 aa12.76□□□□□ -0.37
SNX3-204ENST00000426155 LDB3O75112 727 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 MYO1DO94832 1006 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 SCELO95171 688 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 GBAP04062 536 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 ICAM2P13598 275 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 KRT15P19012 456 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 SERPINB1P30740 379 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 PIK3CBP42338 1070 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 ZNF169Q14929 603 aaPredicted RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 EXT1Q16394 746 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 AP5B1Q2VPB7 878 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 UNC50Q53HI1 259 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 SGO1Q5FBB7 561 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 TCHHL1Q5QJ38 904 aaPredicted RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 ZNF678Q5SXM1 525 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 OR4C11Q6IEV9 310 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 METTL2BQ6P1Q9 378 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 SH2D5Q6ZV89 423 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 CHSY3Q70JA7 882 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 BEST3Q8N1M1 668 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 NFAM1Q8NET5 270 aaPredicted RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 M1APQ8TC57 530 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 ACMSDQ8TDX5 336 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 TRPC4APQ8TEL6 797 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 AENQ8WTP8 325 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 LMF1Q96S06 567 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 HBEGFQ99075 208 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 NTMT1Q9BV86 223 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 C1QTNF3Q9BXJ4 246 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 MMP25Q9NPA2 562 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 PNO1Q9NRX1 252 aaKnown RBP12.75□□□□□ -0.37
SNX3-204ENST00000426155 ANKRD10Q9NXR5 420 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 TSC22D4Q9Y3Q8 395 aa12.75□□□□□ -0.37
SNX3-204ENST00000426155 MMACHCQ9Y4U1 282 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms