RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 KCMF1Q9P0J7 381 aa17.31■□□□□ 0.36
MSH5-207ENST00000425703 PCTPQ9UKL6 214 aa17.31■□□□□ 0.36
MSH5-207ENST00000425703 CLDN16Q9Y5I7 305 aa17.31■□□□□ 0.36
MSH5-207ENST00000425703 LRRK2Q5S007 2527 aa17.31■□□□□ 0.36
MSH5-207ENST00000425703 OR5H15A6NDH6 313 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 A8MUI8 341 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 TCP11X1B4DZS4 312 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 FOXE1O00358 373 aaPredicted RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 ZIC2O95409 532 aaPredicted RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 WDPCPO95876 746 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 TGFB1P01137 390 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 PTX3P26022 381 aaPredicted RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 MEP1AQ16819 746 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 TEX35Q5T0J7 233 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 ZNF793Q6ZN11 406 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 CATSPER1Q8NEC5 780 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 NFAM1Q8NET5 270 aaPredicted RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 OR1N1Q8NGS0 311 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 RGMAQ96B86 450 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 C19orf60Q96EN9 201 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 MAGEB10Q96LZ2 347 aaPredicted RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 NOL11Q9H8H0 719 aaKnown RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 PLA2G3Q9NZ20 509 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 ABI3Q9P2A4 366 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 MAP10Q9P2G4 905 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 PPIEQ9UNP9 301 aaKnown RBP17.3■□□□□ 0.36
MSH5-207ENST00000425703 SPACA6W5XKT8 324 aa17.3■□□□□ 0.36
MSH5-207ENST00000425703 OR7A17O14581 309 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CTNSO60931 367 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 RPS17P08708 135 aaKnown RBP17.29■□□□□ 0.36
MSH5-207ENST00000425703 SBK3P0C264 359 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 SSR2P43308 183 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CCNG1P51959 295 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 SLC13A2Q13183 592 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CUL3Q13618 768 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CPSF6Q16630 551 aaKnown RBP eCLIP17.29■□□□□ 0.36
MSH5-207ENST00000425703 GGTA1PQ4G0N0 100 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 OR4C11Q6IEV9 310 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CYP4X1Q8N118 509 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 ARMC10Q8N2F6 343 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 ZCCHC7Q8N3Z6 543 aaKnown RBP17.29■□□□□ 0.36
MSH5-207ENST00000425703 AMER2Q8N7J2 671 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 FAM47BQ8NA70 645 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 WDR20Q8TBZ3 569 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 ATP6V1E2Q96A05 226 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 MTERF1Q99551 399 aaKnown RBP17.29■□□□□ 0.36
MSH5-207ENST00000425703 OR51B5Q9H339 312 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 PRM3Q9NNZ6 103 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 MS4A12Q9NXJ0 267 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 RNF11Q9Y3C5 154 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 PCDHGB6Q9Y5F9 930 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 SHANK1Q9Y566 2161 aa17.29■□□□□ 0.36
MSH5-207ENST00000425703 CBX6O95503 412 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 GSTA1P08263 222 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 TAC1P20366 129 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 GNLYP22749 145 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 RAP1GDS1P52306 607 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 HNRNPFP52597 415 aaKnown RBP17.28■□□□□ 0.36
MSH5-207ENST00000425703 DDX39BQ13838 428 aaKnown RBP17.28■□□□□ 0.36
MSH5-207ENST00000425703 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
MSH5-207ENST00000425703 ZRSR2Q15696 482 aaKnown RBP17.28■□□□□ 0.36
MSH5-207ENST00000425703 CRLF3Q8IUI8 442 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 GSPT2Q8IYD1 628 aaKnown RBP17.28■□□□□ 0.36
MSH5-207ENST00000425703 FAM26EQ8N5C1 309 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 TMEM52Q8NDY8 209 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 B3GNT7Q8NFL0 401 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 OR52B6Q8NGF0 335 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 SUN3Q8TAQ9 357 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 MZB1Q8WU39 189 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.28■□□□□ 0.36
MSH5-207ENST00000425703 ZBTB26Q9HCK0 441 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 ADAP2Q9NPF8 381 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 NTNG1Q9Y2I2 539 aa17.28■□□□□ 0.36
MSH5-207ENST00000425703 SCN2AQ99250 2005 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 A8MT66 165 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 RTCAO00442 366 aaKnown RBP17.27■□□□□ 0.36
MSH5-207ENST00000425703 PLPP1O14494 284 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 OTCP00480 354 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 UQCRFS1P47985 274 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 RPS13P62277 151 aaKnown RBP17.27■□□□□ 0.36
MSH5-207ENST00000425703 TRAF3Q13114 568 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 SERTAD2Q14140 314 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 RASA2Q15283 850 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 ELAVL1Q15717 326 aaKnown RBP17.27■□□□□ 0.36
MSH5-207ENST00000425703 FRG2Q64ET8 278 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 RPS19BP1Q86WX3 136 aaKnown RBP17.27■□□□□ 0.36
MSH5-207ENST00000425703 TDRPQ86YL5 185 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 BEST3Q8N1M1 668 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 APCDD1LQ8NCL9 501 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 ZNF483Q8TF39 744 aaPredicted RBP17.27■□□□□ 0.36
MSH5-207ENST00000425703 FAR1Q8WVX9 515 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 FRG2BQ96QU4 278 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 CSF3RQ99062 836 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 NPAS2Q99743 824 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 MAPKAP1Q9BPZ7 522 aa17.27■□□□□ 0.36
MSH5-207ENST00000425703 TGFBR3LH3BV60 316 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 PRAMEF2O60811 474 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 MYO1DO94832 1006 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 SEMA3DO95025 777 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 GPR143P51810 404 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms