RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CATSPEREQ5SY80 951 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 TMTC4Q5T4D3 741 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PRAMEF9Q5VWM5 478 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 LCN8Q6JVE9 175 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NOXRED1Q6NXP6 359 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ADCK2Q7Z695 626 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 C17orf64Q86WR6 236 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PTRH1Q86Y79 214 aaKnown RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 DNAJB14Q8TBM8 379 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 NEIL2Q969S2 332 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 FCRL4Q96PJ5 515 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 CGREF1Q99674 301 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SLC39A3Q9BRY0 314 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PITHD1Q9GZP4 211 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 ALG2Q9H553 416 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 SIDT1Q9NXL6 827 aaKnown RBP14.87□□□□□ -0.03
SHOX2-202ENST00000425436 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
SHOX2-202ENST00000425436 FREM2Q5SZK8 3169 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 PRSS51A0A1B0GVH4 220 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 C9JVG2 144 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 CTSVO60911 334 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 CCNDBP1O95273 360 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 UMPSP11172 480 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 CDH1P12830 882 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 CXCR2P25025 360 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 S100A3P33764 101 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 MSX2P35548 267 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ASMTP46597 345 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ERFP50548 548 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 MEF2AQ02078 507 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-202ENST00000425436 LIPEQ05469 1076 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ACSM2AQ08AH3 577 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 CAPRIN1Q14444 709 aaKnown RBP14.86□□□□□ -0.03
SHOX2-202ENST00000425436 PTGR1Q14914 329 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 FAM174BQ3ZCQ3 159 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 SPIN4Q56A73 249 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 C6orf10Q5SRN2 563 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ACSM2BQ68CK6 577 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 FBXO42Q6P3S6 717 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 SLC2A7Q6PXP3 512 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 DLEU7Q6UYE1 221 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 PLD3Q8IV08 490 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 LAS2Q8IYD9 372 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 KRT78Q8N1N4 520 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 DNAJC22Q8N4W6 341 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 FAM156AQ8NDB6 213 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ADCY4Q8NFM4 1077 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 OR7G3Q8NG95 312 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 SLC5A11Q8WWX8 675 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ITCHQ96J02 903 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 OR52E6Q96RD3 313 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 KCTD14Q9BQ13 255 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-202ENST00000425436 NRSN2Q9GZP1 204 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 VCXQ9H320 206 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 FGF21Q9NSA1 209 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 ARMC1Q9NVT9 282 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 SIRT5Q9NXA8 310 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 PPT2Q9UMR5 302 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 SNX13Q9Y5W8 968 aa14.86□□□□□ -0.03
SHOX2-202ENST00000425436 MDC1Q14676 2089 aaKnown RBP14.85□□□□□ -0.03
SHOX2-202ENST00000425436 A0A0J9YVX5 310 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 POLR1CO15160 346 aaPredicted RBP14.85□□□□□ -0.03
SHOX2-202ENST00000425436 GMNNO75496 209 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 FKBP9O95302 570 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 CD22P20273 847 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 IL10P22301 178 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 SERPINB1P30740 379 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 PIK3CBP42338 1070 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 LRRC74AQ0VAA2 488 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 TRIP10Q15642 601 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 FXNQ16595 210 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 OGFRL1Q5TC84 451 aaPredicted RBP14.85□□□□□ -0.03
SHOX2-202ENST00000425436 ZNF425Q6IV72 752 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 TLDC1Q6P9B6 456 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 NXPE4Q6UWF7 544 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 PAQR7Q86WK9 346 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 GTF2H4Q92759 462 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 APIPQ96GX9 242 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 SLC46A1Q96NT5 459 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 ECSITQ9BQ95 431 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 FBXO8Q9NRD0 319 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 MCM8Q9UJA3 840 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 SNX7Q9UNH6 387 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 MAN2B2Q9Y2E5 1009 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 PCDHGA8Q9Y5G5 932 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 CEP295Q9C0D2 2601 aa14.85□□□□□ -0.03
SHOX2-202ENST00000425436 FEZF1A0PJY2 475 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 OR2A25A4D2G3 310 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 B4E171 279 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 TMEM150CB9EJG8 249 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 C9orf172C9J069 976 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 HAT1O14929 419 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 HNRNPRO43390 633 aaKnown RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 BRINP1O60477 761 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 GPIP06744 558 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 SDC1P18827 310 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 RBMS1P29558 406 aaKnown RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 TSPAN7P41732 249 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 GABRA4P48169 554 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms