RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 JUNDP17535 347 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PPIBP23284 216 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 PCGF2P35227 344 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 P2RY2P41231 377 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 KIR2DL1P43626 348 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 IDH2P48735 452 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 CDH12P55289 794 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TAS2R50P59544 299 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SPIBQ01892 262 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 C2orf80Q0P641 193 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PERM1Q5SV97 790 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PTCRAQ6ISU1 281 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 FAHD1Q6P587 224 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 DSG4Q86SJ6 1040 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 FAM124AQ86V42 546 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SNX29P2Q8IUI4 249 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ZNF740Q8NDX6 193 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 KLK6Q92876 244 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PPCDCQ96CD2 204 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 REPS1Q96D71 796 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SH3YL1Q96HL8 342 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 PPP1R16AQ96I34 528 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 FEVQ99581 238 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 CHST8Q9H2A9 424 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SPNS1Q9H2V7 528 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 REEP4Q9H6H4 257 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ARMC7Q9H6L4 198 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GULP1Q9UBP9 304 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ZNF282Q9UDV7 671 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 SERGEFQ9UGK8 458 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.2□□□□□ -0.782e-10■■■■□ 23.5
CUX1-205ENST00000425244 HSPE1-MOB4S4R3N1 261 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PIPSLA2A3N6 862 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 CBFA2T3O75081 653 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 WBP4O75554 376 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 GCM2O75603 506 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 DNAJB5O75953 348 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 NPPBP16860 134 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ITGB7P26010 798 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TGFBR1P36897 503 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GPR1P46091 355 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TMEM196Q5HYL7 178 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GCNT6Q5T4J0 391 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SDE2Q6IQ49 451 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ERN2Q76MJ5 926 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 RNF130Q86XS8 419 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ENTHD1Q8IYW4 607 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 MMP21Q8N119 569 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SLC5A8Q8N695 610 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 IL17RCQ8NAC3 791 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 DNASE1L2Q92874 299 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 COQ8BQ96D53 544 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 VPS35Q96QK1 796 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ACOT13Q9NPJ3 140 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PRDM8Q9NQV8 689 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TBCCD1Q9NVR7 557 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 RLIMQ9NVW2 624 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SELENONQ9NZV5 590 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 NDUFAF4Q9P032 175 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PCDHGB3Q9Y5G1 929 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TSPAN11A1L157 253 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 CLDN25C9JDP6 229 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 RNASET2O00584 256 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 FUCA1P04066 466 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 HOXB2P14652 356 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 POU2F1P14859 743 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PORP16435 677 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 NUDT6P53370 316 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 C21orf58P58505 322 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SCARB2Q14108 478 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 CST6Q15828 149 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 HIST2H2ACQ16777 129 aaPredicted RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 SYT16Q17RD7 645 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 IQCCQ4KMZ1 466 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 HIST2H2AA3Q6FI13 130 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TMIEQ8NEW7 156 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 OR10G2Q8NGC3 310 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 RPLP0P6Q8NHW5 317 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 UTP15Q8TED0 518 aaKnown RBP10.2□□□□□ -0.78
CUX1-205ENST00000425244 APH1BQ8WW43 257 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 PROX1Q92786 737 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 DTD2Q96FN9 168 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GUCD1Q96NT3 240 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 EPYCQ99645 322 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 ALOXE3Q9BYJ1 711 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 DMRT3Q9NQL9 472 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 GPATCH2Q9NW75 528 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 RNF6Q9Y252 685 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 SNX8Q9Y5X2 465 aa10.2□□□□□ -0.78
CUX1-205ENST00000425244 TRPM6Q9BX84 2022 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 M0R129 80 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 SLC22A1O15245 554 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 C1GALT1C1LP0DN25 315 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 NTSR1P30989 418 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ARPC4P59998 168 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms