RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CLDN4O14493 209 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 C8orf89P0DMQ9 161 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 BGNP21810 368 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 BSGP35613 385 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 RRADP55042 308 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 CLYBLQ8N0X4 340 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 EFCAB3Q8N7B9 438 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 FAM47BQ8NA70 645 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 AGR3Q8TD06 166 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 APOBEC4Q8WW27 367 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 FER1L6-AS2Q96M78 137 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 ARHGAP9Q9BRR9 750 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 DDX31Q9H8H2 851 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 TNFRSF12AQ9NP84 129 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 LANCL2Q9NS86 450 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 P4HTMQ9NXG6 502 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 MS4A12Q9NXJ0 267 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 C19orf25Q9UFG5 118 aaPredicted RBP23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 PHF11Q9UIL8 331 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 TRAF6Q9Y4K3 522 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 HS3ST3B1Q9Y662 390 aa23.94■■□□□ 1.42
TSPAN3-203ENST00000424443 CACNA1BQ00975 2339 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 ARGFXA6NJG6 315 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 FAM227AF5H4B4 570 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 PRMT3O60678 531 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 ACPPP15309 386 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 CPN2P22792 545 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 WDR4P57081 412 aaKnown RBP23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 MED25Q71SY5 747 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 METTL4Q8N3J2 472 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 OR6Y1Q8NGX8 325 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 EXTL1Q92935 676 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 MAPKAP1Q9BPZ7 522 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 ACPTQ9BZG2 426 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 LYARQ9NX58 379 aaKnown RBP23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 ADAM29Q9UKF5 820 aa23.93■■□□□ 1.42
TSPAN3-203ENST00000424443 SERTM1A2A2V5 107 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 SNUPNO95149 360 aaKnown RBP23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 KLK1P06870 262 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 FGF4P08620 206 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 TLX1P31314 330 aaPredicted RBP23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 ABCE1P61221 599 aaKnown RBP23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 STX3Q13277 289 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 NSDHLQ15738 373 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 TBR1Q16650 682 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 SPDYAQ5MJ70 313 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 TRIM42Q8IWZ5 723 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 ZNF595Q8IYB9 648 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 TMEM102Q8N9M5 508 aaPredicted RBP23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 PLPP5Q8NEB5 264 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 PTCHD1Q96NR3 888 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 ZNF446Q9NWS9 450 aa23.92■■□□□ 1.42
TSPAN3-203ENST00000424443 OR2W5A6NFC9 320 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 SOCS6O14544 535 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 EEDO75530 441 aaKnown RBP23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 GBAP04062 536 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 BUD31P41223 144 aaPredicted RBP23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 HMGCS1Q01581 520 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 CCNYL2Q5T2Q4 361 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 KANK2Q63ZY3 851 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 QSOX2Q6ZRP7 698 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 COMMD6Q7Z4G1 85 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 GPR180Q86V85 440 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 C8orf44Q96CB5 159 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 ZNF717Q9BY31 904 aaPredicted RBP23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 PRDM9Q9NQV7 894 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 PRTFDC1Q9NRG1 225 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 KCNMB2Q9Y691 235 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 NUP210LQ5VU65 1888 aa23.91■■□□□ 1.42
TSPAN3-203ENST00000424443 A0A0A6YYD5 115 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 FAM58BPP0C7Q3 252 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 CHN1P15882 459 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 SLC1A6P48664 564 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 RHAGQ02094 409 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 BTKQ06187 659 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 ACSM2AQ08AH3 577 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 SLC13A2Q13183 592 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 SPIN4Q56A73 249 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 ATG16L1Q676U5 607 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 ACSM2BQ68CK6 577 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 KIRREL2Q6UWL6 708 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 C1orf52Q8N6N3 182 aaKnown RBP23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 CLEC1AQ8NC01 280 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 ING2Q9H160 280 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 KCMF1Q9P0J7 381 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 FBXL4Q9UKA2 621 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 MMACHCQ9Y4U1 282 aa23.9■■□□□ 1.42
TSPAN3-203ENST00000424443 BLACEA4D250 179 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 SLC28A1O00337 649 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 LYPLA1O75608 230 aaPredicted RBP23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 HSD17B7P56937 341 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 EEF1A2Q05639 463 aaKnown RBP23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 TBL3Q12788 808 aaKnown RBP23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 TMEM205Q6UW68 189 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 TRIM46Q7Z4K8 759 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 DDIASQ8IXT1 998 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 OR11G2Q8NGC1 345 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 TWIST2Q8WVJ9 160 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 CSF3RQ99062 836 aa23.89■■□□□ 1.42
TSPAN3-203ENST00000424443 ILKAPQ9H0C8 392 aaPredicted RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms