RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 GBAP04062 536 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 F8A1P23610 371 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 TIA1P31483 386 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 RAB38P57729 211 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 OCA2Q04671 838 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 SLAMF1Q13291 335 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 KIAA0040Q15053 153 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 CYP20A1Q6UW02 462 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 VASH2Q86V25 355 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 STT3BQ8TCJ2 826 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 ADAMTS18Q8TE60 1221 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 KIAA1143Q96AT1 154 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 PEX11GQ96HA9 241 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 NAF1Q96HR8 494 aaKnown RBP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 FCRL1Q96LA6 429 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 PPP1R36Q96LQ0 422 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 PPP3R2Q96LZ3 170 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 OR1F2PQ96R84 312 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 SPSB2Q99619 263 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 MAPKAP1Q9BPZ7 522 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 YIPF2Q9BWQ6 316 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 GPR87Q9BY21 358 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 DPH1Q9BZG8 443 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 GPN2Q9H9Y4 310 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 LYARQ9NX58 379 aaKnown RBP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 KCMF1Q9P0J7 381 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 GIMAP2Q9UG22 337 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 MCM8Q9UJA3 840 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 NXT1Q9UKK6 140 aaKnown RBP16.04■□□□□ 0.16
COL7A1-202ENST00000422991 ASB4Q9Y574 426 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 USH1CQ9Y6N9 552 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 ARHGAP10A1A4S6 786 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 SDHDO14521 159 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 SEC22BO75396 215 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 JRKO75564 520 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 KLF7O75840 302 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 BMP10O95393 424 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 FHP07954 510 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 CD63P08962 238 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 ZGLP1P0C6A0 271 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 PRR35P0CG20 571 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 LIFP15018 202 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 ALOX15P16050 662 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 IL10P22301 178 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 PTPN4P29074 926 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 GYS2P54840 703 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 FOXL2P58012 376 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 RPS15P62841 145 aaKnown RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 RPL38P63173 70 aaKnown RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 ATP6AP1LQ52LC2 224 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 VWA2Q5GFL6 755 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 CCNYL2Q5T2Q4 361 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 MED25Q71SY5 747 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 TBC1D20Q96BZ9 403 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 MIEF2Q96C03 454 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 TUBGCP3Q96CW5 907 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 CSF3RQ99062 836 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 RBCK1Q9BYM8 510 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 ACTL8Q9H568 366 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 LANCL2Q9NS86 450 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 IL17BQ9UHF5 180 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 PHF11Q9UIL8 331 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 KCND3Q9UK17 655 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 FBXW2Q9UKT8 454 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 FARSAQ9Y285 508 aaKnown RBP16.03■□□□□ 0.16
COL7A1-202ENST00000422991 PADI2Q9Y2J8 665 aa16.03■□□□□ 0.16
COL7A1-202ENST00000422991 PSMD12O00232 456 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 CYR61O00622 381 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 PEX11AO75192 247 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 EIF2S3P41091 472 aaKnown RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 MAPK12P53778 367 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 RPS18P62269 152 aaKnown RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 TNFRSF17Q02223 184 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 SRSF6Q13247 344 aaKnown RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 RFTN2Q52LD8 501 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 C6orf136Q5SQH8 315 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 VWA5B1Q5TIE3 1220 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 FAM69BQ5VUD6 431 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 NOXRED1Q6NXP6 359 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 GPR180Q86V85 440 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 TMEM151BQ8IW70 566 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 PRSS58Q8IYP2 241 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 FAM47BQ8NA70 645 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 OR2Y1Q8NGV0 311 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 EFHD1Q9BUP0 239 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 EBPLQ9BY08 206 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 SOX17Q9H6I2 414 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 AKTIPQ9H8T0 292 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 TCFL5Q9UL49 500 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 DLGAP4Q9Y2H0 992 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 TMED5Q9Y3A6 229 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 PTRH2Q9Y3E5 179 aaKnown RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 ATG4BQ9Y4P1 393 aa16.02■□□□□ 0.16
COL7A1-202ENST00000422991 POLR3HQ9Y535 204 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-202ENST00000422991 SPACA6W5XKT8 324 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms