RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 IGKV3D-11A0A0A0MRZ8 115 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 TCRBV16S1A1N1A0A5B0 115 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 OR5H15A6NDH6 313 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 LRRC14BA6NHZ5 514 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 SH3BGRLO75368 114 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 SIX3O95343 332 aaPredicted RBP20.53■□□□□ 0.88
TRAF4-204ENST00000422344 EEF1DP29692 281 aaKnown RBP20.53■□□□□ 0.88
TRAF4-204ENST00000422344 LIM2P55344 173 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 HSD17B7P56937 341 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 ELOAQ14241 798 aaKnown RBP20.53■□□□□ 0.88
TRAF4-204ENST00000422344 NR6A1Q15406 480 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 MEP1AQ16819 746 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 AP5B1Q2VPB7 878 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 ACER2Q5QJU3 275 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 FCRLBQ6BAA4 426 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 FAM180AQ6UWF9 173 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 ATP6V1E2Q96A05 226 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 MTBPQ96DY7 904 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 PHF21BQ96EK2 531 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 NECTIN3Q9NQS3 549 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 DAPP1Q9UN19 280 aa20.53■□□□□ 0.88
TRAF4-204ENST00000422344 SAGE2PA6NJ88 616 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 A8MUA0 341 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 UGDHO60701 494 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 CLDN1O95832 211 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 FAM153BP0C7A2 387 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 SSR2P43308 183 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 RAP1GDS1P52306 607 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 FAM153CQ494X1 144 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 KHDRBS2Q5VWX1 349 aaKnown RBP20.52■□□□□ 0.88
TRAF4-204ENST00000422344 H3F3CQ6NXT2 135 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 CRLF3Q8IUI8 442 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 ZNF595Q8IYB9 648 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 HUS1BQ8NHY5 278 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 GRHL3Q8TE85 626 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 MRPL57Q9BQC6 102 aaKnown RBP20.52■□□□□ 0.88
TRAF4-204ENST00000422344 MRPL46Q9H2W6 279 aaKnown RBP20.52■□□□□ 0.88
TRAF4-204ENST00000422344 PRDM7Q9NQW5 492 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 ERRFI1Q9UJM3 462 aaPredicted RBP20.52■□□□□ 0.88
TRAF4-204ENST00000422344 NTNG1Q9Y2I2 539 aa20.52■□□□□ 0.88
TRAF4-204ENST00000422344 IQANK1A0A1B0GTG1 560 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 SYNDIG1LA6NDD5 238 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 ENO4A6NNW6 628 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 STX16-NPEPL1H3BU86 382 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 SAP18O00422 153 aaKnown RBP20.51■□□□□ 0.87
TRAF4-204ENST00000422344 E2F3O00716 465 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 STX16O14662 325 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 PIK3CBP42338 1070 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 CPSF6Q16630 551 aaKnown RBP eCLIP20.51■□□□□ 0.87
TRAF4-204ENST00000422344 TEX35Q5T0J7 233 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 RPUSD3Q6P087 351 aaKnown RBP20.51■□□□□ 0.87
TRAF4-204ENST00000422344 SCUBE1Q8IWY4 988 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 GSPT2Q8IYD1 628 aaKnown RBP20.51■□□□□ 0.87
TRAF4-204ENST00000422344 BEST3Q8N1M1 668 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 ACOT4Q8N9L9 421 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 LRRN4CLQ8ND94 238 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 CCDC77Q9BR77 488 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 OR51B5Q9H339 312 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 LYRM4Q9HD34 91 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 PNO1Q9NRX1 252 aaKnown RBP20.51■□□□□ 0.87
TRAF4-204ENST00000422344 CPAMD8Q8IZJ3 1885 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 SCN2AQ99250 2005 aa20.51■□□□□ 0.87
TRAF4-204ENST00000422344 RTCAO00442 366 aaKnown RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 MYO1DO94832 1006 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 CLDN9O95484 217 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 HIST1H1TP22492 207 aaPredicted RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 ATP5A1P25705 553 aaKnown RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 DCTP40126 519 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 SLC29A2Q14542 456 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 INAQ16352 499 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 ADGRD1Q6QNK2 874 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 UBE3DQ7Z6J8 389 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 CLNKQ7Z7G1 428 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 CNPY4Q8N129 248 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 BCORP1Q8N888 145 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 ELP5Q8TE02 316 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 RGMAQ96B86 450 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 MTERF1Q99551 399 aaKnown RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 UTP23Q9BRU9 249 aaKnown RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 NOL11Q9H8H0 719 aaKnown RBP20.5■□□□□ 0.87
TRAF4-204ENST00000422344 DMRT3Q9NQL9 472 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 TSC22D4Q9Y3Q8 395 aa20.5■□□□□ 0.87
TRAF4-204ENST00000422344 ANKUB1A6NFN9 424 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 WIPF3A6NGB9 483 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 H0YIV9 168 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 PRAMEF2O60811 474 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 CBX6O95503 412 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 LDLRP01130 860 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 PTX3P26022 381 aaPredicted RBP20.49■□□□□ 0.87
TRAF4-204ENST00000422344 GCAP28676 217 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 CCNG1P51959 295 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 HNRNPFP52597 415 aaKnown RBP20.49■□□□□ 0.87
TRAF4-204ENST00000422344 STX4Q12846 297 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 DEPDC1Q5TB30 811 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 OR4C11Q6IEV9 310 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 ZNF793Q6ZN11 406 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 TIFABQ6ZNK6 161 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 LGI4Q8N135 537 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 RNF175Q8N4F7 328 aa20.49■□□□□ 0.87
TRAF4-204ENST00000422344 KIF2BQ8N4N8 673 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms