RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 PPIEQ9UNP9 301 aaKnown RBP23.82■■□□□ 1.4
SMDT1-202ENST00000422252 SYNDIG1LA6NDD5 238 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 SYCE1LA8MT33 242 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 PPP2R1BP30154 601 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 HLCSP50747 726 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 IRF9Q00978 393 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 PCDH1Q08174 1060 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 MAPKAPK3Q16644 382 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 KRTCAP3Q53RY4 240 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 MROH9Q5TGP6 573 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 MED27Q6P2C8 311 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.81■■□□□ 1.4
SMDT1-202ENST00000422252 CLNKQ7Z7G1 428 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 LAS2Q8IYD9 372 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 CENPLQ8N0S6 344 aaPredicted RBP23.81■■□□□ 1.4
SMDT1-202ENST00000422252 RHEBL1Q8TAI7 183 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 ZNF473Q8WTR7 871 aaKnown RBP23.81■■□□□ 1.4
SMDT1-202ENST00000422252 VMP1Q96GC9 406 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 GPR137Q96N19 417 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 PRM3Q9NNZ6 103 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 ADAP2Q9NPF8 381 aa23.81■■□□□ 1.4
SMDT1-202ENST00000422252 NME2P1O60361 137 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 URI1O94763 535 aaPredicted RBP23.8■■□□□ 1.4
SMDT1-202ENST00000422252 C2P06681 752 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 PCNAP12004 261 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 MTHFD2P13995 350 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 NME2P22392 152 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 PHBP35232 272 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 CA7P43166 264 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 FAM83EQ2M2I3 478 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 UBE3DQ7Z6J8 389 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 ZNF227Q86WZ6 799 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 THAP3Q8WTV1 239 aaPredicted RBP23.8■■□□□ 1.4
SMDT1-202ENST00000422252 NCLNQ969V3 563 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 TMEM125Q96AQ2 219 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 C16orf45Q96MC5 204 aaPredicted RBP23.8■■□□□ 1.4
SMDT1-202ENST00000422252 TBCDQ9BTW9 1192 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 LYRM4Q9HD34 91 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 SNX15Q9NRS6 342 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 SUCOQ9UBS9 1254 aaKnown RBP23.8■■□□□ 1.4
SMDT1-202ENST00000422252 ZNF223Q9UK11 482 aaPredicted RBP23.8■■□□□ 1.4
SMDT1-202ENST00000422252 FBXW2Q9UKT8 454 aa23.8■■□□□ 1.4
SMDT1-202ENST00000422252 CCDC189A1A4V9 331 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 HMX2A2RU54 273 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 CTNSO60931 367 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 EPB42P16452 691 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 SERPINB1P30740 379 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 GPR143P51810 404 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 UAP1Q16222 522 aaPredicted RBP23.79■■□□□ 1.4
SMDT1-202ENST00000422252 WHAMMP3Q1A5X7 153 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 TMEM35AQ53FP2 167 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 ZNF793Q6ZN11 406 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 OR7G3Q8NG95 312 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 TSPAN10Q9H1Z9 355 aaPredicted RBP23.79■■□□□ 1.4
SMDT1-202ENST00000422252 KCMF1Q9P0J7 381 aa23.79■■□□□ 1.4
SMDT1-202ENST00000422252 NPIPA5E9PKD4 350 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 CCL21O00585 134 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 SLC19A2O60779 497 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 ATP5A1P25705 553 aaKnown RBP23.78■■□□□ 1.4
SMDT1-202ENST00000422252 CASP6P55212 293 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 ACAP2Q15057 778 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 ELAVL1Q15717 326 aaKnown RBP23.78■■□□□ 1.4
SMDT1-202ENST00000422252 GRHL2Q6ISB3 625 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 CHSY3Q70JA7 882 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 TMEM132CQ8N3T6 1108 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 TEX9Q8N6V9 391 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 ACOT4Q8N9L9 421 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 MAPKAP1Q9BPZ7 522 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 CCDC77Q9BR77 488 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 NINJ2Q9NZG7 142 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 SH3BGRL2Q9UJC5 107 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 NPIPA1Q9UND3 350 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 ANGPTL3Q9Y5C1 460 aa23.78■■□□□ 1.4
SMDT1-202ENST00000422252 RTCAO00442 366 aaKnown RBP23.77■■□□□ 1.4
SMDT1-202ENST00000422252 SH3BGRLO75368 114 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 ITGA10O75578 1167 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 KLHL2O95198 593 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 TGFB1P01137 390 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 IFNA16P05015 189 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 STX4Q12846 297 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 NAA30Q147X3 362 aaPredicted RBP23.77■■□□□ 1.4
SMDT1-202ENST00000422252 SETDB1Q15047 1291 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 AP5B1Q2VPB7 878 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 MTFR2Q6P444 385 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 CEP128Q6ZU80 1094 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 SIAH3Q8IW03 269 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 CPSF7Q8N684 471 aaKnown RBP23.77■■□□□ 1.4
SMDT1-202ENST00000422252 CMTM7Q96FZ5 175 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 CCDC120Q96HB5 630 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 MAGED4Q96JG8 741 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 ALOXE3Q9BYJ1 711 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 ACSS3Q9H6R3 686 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 MTRF1LQ9UGC7 380 aaKnown RBP23.77■■□□□ 1.4
SMDT1-202ENST00000422252 ADGRE2Q9UHX3 823 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 CLCA3PQ9Y6N3 262 aa23.77■■□□□ 1.4
SMDT1-202ENST00000422252 A0A096LPK6 155 aa23.76■■□□□ 1.39
SMDT1-202ENST00000422252 ZFAND5O76080 213 aa23.76■■□□□ 1.39
SMDT1-202ENST00000422252 SCELO95171 688 aa23.76■■□□□ 1.39
SMDT1-202ENST00000422252 GFAPP14136 432 aa23.76■■□□□ 1.39
SMDT1-202ENST00000422252 HIST1H1TP22492 207 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms