RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 A0A1B0GVC2 190 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 A6NIN4 97 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 HMGN1P05114 100 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 ETFAP13804 333 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 FDXRP22570 491 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 FSHRP23945 695 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 MAGEA3P43357 314 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 MASP1P48740 699 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 TUBA1BP68363 451 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 RPA4Q13156 261 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 LRRC37A5PQ49AS3 106 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 ADGRF1Q5T601 910 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 DUS1LQ6P1R4 473 aaKnown RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 TUBA1AQ71U36 451 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 FBXO15Q8NCQ5 510 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 RHEBL1Q8TAI7 183 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 SUV39H2Q9H5I1 410 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 SIAEQ9HAT2 523 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 HLA-DPB1P04440 258 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 GGT1P19440 569 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 ACADLP28330 430 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 FAM110CQ1W6H9 321 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 KLHL26Q53HC5 615 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 BORAQ6PGQ7 559 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 Q6ZVU0 165 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 GET4Q7L5D6 327 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 PIAS4Q8N2W9 510 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 SLC5A8Q8N695 610 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 OR9Q2Q8NGE9 314 aa12.42□□□□□ -0.42
SCN1B-202ENST00000415950 CXXC1Q9P0U4 656 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 TRPM3Q9HCF6 1732 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-202ENST00000415950 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SLITRK5O94991 958 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 CSNK2A2P19784 350 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 EDNRAP25101 427 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 FBXO43Q4G163 708 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ARHGAP12Q8IWW6 846 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 OXR1Q8N573 874 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 DPAGT1Q9H3H5 408 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 NLKQ9UBE8 527 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 TAC3Q9UHF0 121 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 GPR45Q9Y5Y3 372 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PTPRZ1P23471 2315 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 A8MUA0 341 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 GRK5P34947 590 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 RAB2AP61019 212 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ILF3Q12906 894 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 CHAF1BQ13112 559 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 LRRC32Q14392 662 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 EXOC3L2Q2M3D2 409 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 CLEC14AQ86T13 490 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 JAGN1Q8N5M9 183 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 LMNTD1Q8N9Z9 388 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 MFSD2AQ8NA29 543 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 POGLUT1Q8NBL1 392 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF195O14628 629 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SERPINA3P01011 423 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PPM1AP35813 382 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 MAP3K8P41279 467 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SOX2P48431 317 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 KHKP50053 298 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ATAT1Q5SQI0 421 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 RAB12Q6IQ22 244 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 TMPRSS9Q7Z410 1059 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PAQR7Q86WK9 346 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SDR16C5Q8N3Y7 309 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 NECTIN4Q96NY8 510 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF717Q9BY31 904 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SMG9Q9H0W8 520 aaKnown RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF304Q9HCX3 659 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZDHHC3Q9NYG2 299 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 DLGAP4Q9Y2H0 992 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ZBTB42B2RXF5 422 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 TNFRSF10BO14763 440 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 MPIP34949 423 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PIGAP37287 484 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 SMSP52788 366 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PITPNAQ00169 270 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 RCAN2Q14206 197 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 GPR33Q49SQ1 333 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 XKR4Q5GH76 650 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 LRRC66Q68CR7 880 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms