RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 NANOGP8Q6NSW7 305 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 NET1Q7Z628 596 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 ARPINQ7Z6K5 226 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 CARFQ8N187 725 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 SMIM10Q96HG1 83 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 GBP5Q96PP8 586 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 SERINC2Q96SA4 455 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 NUDT22Q9BRQ3 303 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 TRIM8Q9BZR9 551 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 NANOGQ9H9S0 305 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 SERHLQ9NQF3 203 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 LYARQ9NX58 379 aaKnown RBP11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 ATXN7L1Q9ULK2 861 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 MAN2B2Q9Y2E5 1009 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 ASB4Q9Y574 426 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 PCDH15Q96QU1 1955 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 MDC1Q14676 2089 aaKnown RBP11.92□□□□□ -0.5
PRAMEF9-201ENST00000415919 B3GALT2O43825 422 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 RPLP0P05388 317 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 DRD2P14416 443 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PEX19P40855 299 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 TRPC1P48995 793 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 HSD11B2P80365 405 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 LRRC74AQ0VAA2 488 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 NDUFAF5Q5TEU4 345 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MRM1Q6IN84 353 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 TMEM214Q6NUQ4 689 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CYB5D1Q6P9G0 228 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 ZNF621Q6ZSS3 439 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 SLC15A3Q8IY34 581 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 KIAA2013Q8IYS2 634 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CLECL1Q8IZS7 167 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 IFI44Q8TCB0 444 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 TMEM125Q96AQ2 219 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CIDECQ96AQ7 238 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MAPKAP1Q9BPZ7 522 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PAIP1Q9H074 479 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 DENND2DQ9H6A0 471 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CMTM6Q9NX76 183 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 VAPAQ9P0L0 249 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 BTNL2Q9UIR0 455 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PCDHGB4Q9UN71 923 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PCDHB14Q9Y5E9 798 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PCDHA9Q9Y5H5 950 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MN1Q10571 1320 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 LNP1A1A4G5 178 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 RNASET2O00584 256 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 NME4O00746 187 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 SCN2BO60939 215 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 SCELO95171 688 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CTSBP07858 339 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 ZNF883P0CG24 379 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CKMT1AP12532 417 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 IL1RNP18510 177 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MSX2P35548 267 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CDKN2CP42773 168 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 GRK6P43250 576 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 SNRPNP63162 240 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 KCNAB1Q14722 419 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 NDUFA9Q16795 377 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 TMTC4Q5T4D3 741 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 FAM156AQ8NDB6 213 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 OR4A15Q8NGL6 344 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 EXOSC8Q96B26 276 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 SH3GL1Q99961 368 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CHRNA10Q9GZZ6 450 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 LRRN3Q9H3W5 708 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 ABCD2Q9UBJ2 740 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 POMPQ9Y244 141 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 ATG4BQ9Y4P1 393 aa11.91□□□□□ -0.5
PRAMEF9-201ENST00000415919 CABIN1Q9Y6J0 2220 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 A0A1W2PR48 441 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 A0A1W2PRB8 838 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 PRORSD1PA6NEY8 169 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 ZNF860A6NHJ4 632 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 GLOD5A6NK44 160 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 TBX19O60806 448 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 CPNE6O95741 557 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 RETP07949 1114 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 ABCB1P08183 1280 aaPredicted RBP11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 CPN2P22792 545 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 MTPNP58546 118 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 GTDC1Q4AE62 458 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 RUNDC3AQ59EK9 446 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 TCTE1Q5JU00 501 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 LRIF1Q5T3J3 769 aa11.9□□□□□ -0.5
PRAMEF9-201ENST00000415919 C18orf63Q68DL7 685 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms