RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RPS9P46781 194 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 PEX5P50542 639 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LIMK2P53671 638 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CACNA2D1P54289 1103 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 DEFB103AP81534 67 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 RASGEF1BQ0VAM2 473 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 INAQ16352 499 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CLPPQ16740 277 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 PLK5Q496M5 336 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ZNF542PQ5EBM4 170 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LRRC38Q5VT99 294 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PLEKHA7Q6IQ23 1121 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 C19orf35Q6ZS72 473 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PRSS42Q7Z5A4 293 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ADGRD2Q7Z7M1 963 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ZNF410Q86VK4 478 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LRRC56Q8IYG6 542 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 EID3Q8N140 333 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PDCL2Q8N4E4 241 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 KBTBD3Q8NAB2 608 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 AGR3Q8TD06 166 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PROX1Q92786 737 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MYEOVQ96EZ4 313 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 WBP1Q96G27 269 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 FEVQ99581 238 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 DDX50Q9BQ39 737 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 RNF26Q9BY78 433 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 WWP1Q9H0M0 922 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 DCLRE1BQ9H816 532 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 TRIM36Q9NQ86 728 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 THSD1Q9NS62 852 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 RBM28Q9NW13 759 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 FAM118AQ9NWS6 357 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SLCO1C1Q9NYB5 712 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MALT1Q9UDY8 824 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CCDC171Q6TFL3 1326 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ATXN2Q99700 1313 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 PCDH15Q96QU1 1955 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 A0A0D9SFI3 127 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SERTM2A0A1B0GWG4 89 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 A0A1W2PPE3 182 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 E9PAM4 449 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MAP2K7O14733 419 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SMAD9O15198 467 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 NDUFS4O43181 175 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SMAD6O43541 496 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 NMT2O60551 498 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 DNAJB6O75190 326 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 RETP07949 1114 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LINGO3P0C6S8 592 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 HNRNPA2B1P22626 353 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 EEF1B2P24534 225 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 ADORA1P30542 326 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SSTR2P30874 369 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PGGT1BP53609 377 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 FASTKD1Q53R41 847 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 CEP78Q5JTW2 689 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 VWA5B1Q5TIE3 1220 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 KCTD11Q693B1 232 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 WBP2NLQ6ICG8 309 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PAPD4Q6PIY7 484 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 BLOC1S2Q6QNY1 142 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ZNF782Q6ZMW2 699 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 C17orf107Q6ZR85 190 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 FJX1Q86VR8 437 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PM20D2Q8IYS1 436 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LGI2Q8N0V4 545 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 LILRB4Q8NHJ6 448 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CASP10Q92851 521 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CLDN23Q96B33 292 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 C19orf60Q96EN9 201 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MYADMQ96S97 322 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 GFI1Q99684 422 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 TPPP3Q9BW30 176 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SF3B5Q9BWJ5 86 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 TRPV6Q9H1D0 765 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 IL25Q9H293 177 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 TMEM245Q9H330 911 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 VPS37BQ9H9H4 285 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PELI2Q9HAT8 420 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 Q9N2K0 584 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PIGVQ9NUD9 493 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CNOT2Q9NZN8 540 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 NRCAMQ92823 1304 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MYH6P13533 1939 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SRRM4A7MD48 611 aaKnown RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 FLRT2O43155 660 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 ACSL4O60488 711 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 UQCRFS1P1P0C7P4 283 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 SPP1P10451 314 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 CSRP1P21291 193 aaKnown RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 PCMT1P22061 227 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 MARCKSP29966 332 aaPredicted RBP2.39□□□□□ -2.03
MCF2-204ENST00000414978 CDC25CP30307 473 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 GPR12P47775 334 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 RGS7P49802 495 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 RAG2P55895 527 aa2.39□□□□□ -2.03
MCF2-204ENST00000414978 CDK3Q00526 305 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms