RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 AMER3Q8N944 861 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 TRPV3Q8NET8 790 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 TM4SF19Q96DZ7 209 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 SERPINI1Q99574 410 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 BRINP2Q9C0B6 783 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 LRRN3Q9H3W5 708 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 SOHLH2Q9NX45 425 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 ADGRE2Q9UHX3 823 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 RIMS3Q9UJD0 308 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 SCN2AQ99250 2005 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 PTPRZ1P23471 2315 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-202ENST00000414700 KIF26BQ2KJY2 2108 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 DLL1O00548 723 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 ANKRD28O15084 1053 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 KLHL18O94889 574 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 CPNE6O95741 557 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 CKMT2P17540 419 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 GK3PQ14409 553 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 AASDHQ4L235 1098 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-202ENST00000414700 ASPGQ86U10 573 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 FUNDC1Q8IVP5 155 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 NAXDQ8IW45 347 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 METTL4Q8N3J2 472 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 TBC1D19Q8N5T2 526 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 RCBTB1Q8NDN9 531 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 MS4A6EQ96DS6 147 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 TSSK3Q96PN8 268 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 C17orf62Q9BQA9 187 aa14.76□□□□□ -0.05
SHMT2-202ENST00000414700 CNOT1A5YKK6 2376 aaKnown RBP14.76□□□□□ -0.05
SHMT2-202ENST00000414700 LOC100653049A0A140TA62 436 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 MYOCOSA0A1B0GUC4 107 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ERI3O43414 337 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 EEDO75530 441 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 KRT34O76011 436 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 PIK3R1P27986 724 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SERPINB1P30740 379 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 GABRA4P48169 554 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ALDH3B2P48448 385 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 NUP107P57740 925 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 VSX2P58304 361 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 RELAQ04206 551 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SLC14A1Q13336 389 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SQLEQ14534 574 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ADPRMQ3LIE5 342 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 GK5Q6ZS86 529 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 DNAJC22Q8N4W6 341 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 PROKR1Q8TCW9 393 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TCTN2Q96GX1 697 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 FCRL1Q96LA6 429 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 CD180Q99467 661 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SLC6A16Q9GZN6 736 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 FTSJ1Q9UET6 329 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 MRPS2Q9Y399 296 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 NUP214P35658 2090 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 PSMD12O00232 456 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SLC34A2O95436 690 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ZBTB11O95625 1053 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 KLK1P06870 262 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 IL12AP29459 219 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 BSGP35613 385 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 MLLT3P42568 568 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ZFP36L2P47974 494 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 DUSP3P51452 185 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 RAB8AP61006 207 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 RPS6KA2Q15349 733 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 INAVAQ3KP66 663 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 AGKQ53H12 422 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 SPIN4Q56A73 249 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TOR1AIP1Q5JTV8 583 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 C6orf52Q5T4I8 152 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TMEM71Q6P5X7 295 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 ZNF793Q6ZN11 406 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 MIER2Q8N344 545 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 KRTCAP2Q8N6L1 136 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 EFCAB3Q8N7B9 438 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TSPAN14Q8NG11 270 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TEFMQ96QE5 360 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 RTKNQ9BST9 563 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 BCAP29Q9UHQ4 241 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 PRPF19Q9UMS4 504 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 EIF3LQ9Y262 564 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 RUVBL1Q9Y265 456 aaKnown RBP14.75□□□□□ -0.05
SHMT2-202ENST00000414700 TMED5Q9Y3A6 229 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 HCN4Q9Y3Q4 1203 aa14.75□□□□□ -0.05
SHMT2-202ENST00000414700 CEP250Q9BV73 2442 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 COL27A1Q8IZC6 1860 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-202ENST00000414700 PCDH7O60245 1069 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 LRP3O75074 770 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 SERPINB7O75635 380 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 CAPNS1P04632 268 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 SLC35G6P0C7Q6 338 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 COX4I1P13073 169 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 ZNF24P17028 368 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 FUT4P22083 530 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 ACP1P24666 158 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 GSTM2P28161 218 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 TIA1P31483 386 aaKnown RBP eCLIP14.74□□□□□ -0.053e-16■■■□□ 15.8
SHMT2-202ENST00000414700 STX1BP61266 288 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 MAD2L1Q13257 205 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-202ENST00000414700 SQSTM1Q13501 440 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms