RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ALDH3A2P51648 485 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 GALNT1Q10472 559 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-202ENST00000413872 OR5M3Q8NGP4 307 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 IL17FQ96PD4 163 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 PHF12Q96QT6 1004 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.6■□□□□ 0.25
PHRF1-202ENST00000413872 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 TNFRSF4P43489 277 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 RORCP51449 518 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ACVR1CQ8NER5 493 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 FKBP10Q96AY3 582 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 IL4I1Q96RQ9 567 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 MAU2Q9Y6X3 613 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF821O75541 412 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-202ENST00000413872 PORP16435 677 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-202ENST00000413872 TAS2R43P59537 309 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ADAM8P78325 824 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 PLCXD2Q0VAA5 305 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 OR4C11Q6IEV9 310 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 KCTD7Q96MP8 289 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 FZD3Q9NPG1 666 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 HCFC1R1Q9NWW0 138 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ASB6Q9NWX5 421 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 UGDHO60701 494 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 FARS2O95363 451 aaKnown RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 CSTAP01040 98 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 GABRA3P34903 492 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 RAB2AP61019 212 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 AURKBQ96GD4 344 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 MND1Q9BWT6 205 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 SLC46A2Q9BY10 475 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 RPF2Q9H7B2 306 aaKnown RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 KLHL42Q9P2K6 505 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 PROS1P07225 676 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NR4A1P22736 598 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 CDH11P55287 796 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 RAB43Q86YS6 212 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 ANKFN1Q8N957 763 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 TIGARQ9NQ88 270 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 H3BQ06 376 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 FMO3P31513 532 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 CLDN8P56748 225 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NFE2L1Q14494 772 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 LRIF1Q5T3J3 769 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 ANKRD26P1Q6NSI1 321 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NANOGP8Q6NSW7 305 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 RAB8BQ92930 207 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 L3HYPDHQ96EM0 354 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NARS2Q96I59 477 aaKnown RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NSUN5Q96P11 429 aaKnown RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 NANOGQ9H9S0 305 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 HCFC2Q9Y5Z7 792 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 SLC22A1O15245 554 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 PENKP01210 267 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-202ENST00000413872 STARP49675 285 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 MXD1Q05195 221 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 MEDAGQ5VYS4 303 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 APOOQ9BUR5 198 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 PREBQ9HCU5 417 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 PCDHB16Q9NRJ7 776 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 FTSJ1Q9UET6 329 aa16.59■□□□□ 0.25
PHRF1-202ENST00000413872 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.25
PHRF1-202ENST00000413872 ARSAP15289 507 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 SLC6A4P31645 630 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 MRPS21P82921 87 aaKnown RBP16.58■□□□□ 0.25
PHRF1-202ENST00000413872 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.25
PHRF1-202ENST00000413872 VMACQ2NL98 169 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 YIPF7Q8N8F6 280 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 RPLP0P6Q8NHW5 317 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 FKBP7Q9Y680 259 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 BTAF1O14981 1849 aa16.58■□□□□ 0.25
PHRF1-202ENST00000413872 ZBTB42B2RXF5 422 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 EDNRAP25101 427 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 CXCL12P48061 93 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 COLEC12Q5KU26 742 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 FAM174AQ8TBP5 190 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 HS6ST2Q96MM7 605 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 TBX5Q99593 518 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 LOC100130705A0A1B0GUX0 176 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 CLDN25C9JDP6 229 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 BLOC1S5-TXNDC5H3BN57 136 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 HSF2Q03933 536 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 COQ5Q5HYK3 327 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 KDELC1Q6UW63 502 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 CCDC54Q8NEL0 328 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 HUS1BQ8NHY5 278 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 AXIN1O15169 862 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 HCRTR2O43614 444 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 HTR1EP28566 365 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 CD68P34810 354 aaPredicted RBP16.58■□□□□ 0.24
PHRF1-202ENST00000413872 GPR143P51810 404 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 DSC1Q08554 894 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 FCHO2Q0JRZ9 810 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 PTGR1Q14914 329 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 UBE2J2Q8N2K1 259 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 METTL27Q8N6F8 245 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms