RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SREK1Q8WXA9 508 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 CCT6BQ92526 530 aa6□□□□□ -1.45
USP54-202ENST00000413442 L3HYPDHQ96EM0 354 aa6□□□□□ -1.45
USP54-202ENST00000413442 VMP1Q96GC9 406 aa6□□□□□ -1.45
USP54-202ENST00000413442 RHOXF2Q9BQY4 288 aa6□□□□□ -1.45
USP54-202ENST00000413442 UTP23Q9BRU9 249 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 TRMOQ9BU70 441 aa6□□□□□ -1.45
USP54-202ENST00000413442 TMEM109Q9BVC6 243 aa6□□□□□ -1.45
USP54-202ENST00000413442 EPN3Q9H201 632 aa6□□□□□ -1.45
USP54-202ENST00000413442 SYNPO2LQ9H987 977 aa6□□□□□ -1.45
USP54-202ENST00000413442 PFDN4Q9NQP4 134 aa6□□□□□ -1.45
USP54-202ENST00000413442 SIRT5Q9NXA8 310 aa6□□□□□ -1.45
USP54-202ENST00000413442 SENP1Q9P0U3 644 aa6□□□□□ -1.45
USP54-202ENST00000413442 HCN3Q9P1Z3 774 aa6□□□□□ -1.45
USP54-202ENST00000413442 TRPS1Q9UHF7 1281 aa6□□□□□ -1.45
USP54-202ENST00000413442 YARS2Q9Y2Z4 477 aaKnown RBP6□□□□□ -1.45
USP54-202ENST00000413442 CLCA3PQ9Y6N3 262 aa6□□□□□ -1.45
USP54-202ENST00000413442 CELSR3Q9NYQ7 3312 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ARHGAP10A1A4S6 786 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CLEC18AA5D8T8 446 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CAPN14A8MX76 684 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 KLRC4-KLRK1H3BQV0 150 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 K7EM74 188 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PROM1O43490 865 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PRAMEF2O60811 474 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 B4GALT2O60909 372 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ULK1O75385 1050 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 BCAS2O75934 225 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 SLU7O95391 586 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 PDGFAP04085 211 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 NUDT17P0C025 328 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 KRT15P19012 456 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CD22P20273 847 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CPN2P22792 545 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 EEF1DP29692 281 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 HNRNPH1P31943 449 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 CRHR1P34998 444 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 SERPINB5P36952 375 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 HSD17B3P37058 310 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 SSR2P43308 183 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CYB561P49447 251 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PGGT1BP53609 377 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PLA2G16P53816 162 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PER3P56645 1201 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 DNAJB13P59910 316 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 IGLV3-21P80748 117 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 CLCQ05315 142 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 RBPJQ06330 500 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 Q0VFX4 171 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 GALNT1Q10472 559 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 CSTF3Q12996 717 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 SLC13A2Q13183 592 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 SLAMF1Q13291 335 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 BMPR2Q13873 1038 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 RUNX2Q13950 521 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 UBAP2LQ14157 1087 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 CPSF6Q16630 551 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP54-202ENST00000413442 SYT16Q17RD7 645 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 NADK2Q4G0N4 442 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FHL5Q5TD97 284 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FRG2Q64ET8 278 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 TTC19Q6DKK2 380 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 MRM1Q6IN84 353 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 CYP20A1Q6UW02 462 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FAM180AQ6UWF9 173 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CLEC18BQ6UXF7 455 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 RGS9BPQ6ZS82 235 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 RNF165Q6ZSG1 346 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PRSS41Q7RTY9 318 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 GOLGA7Q7Z5G4 137 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 NUDT13Q86X67 352 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 TMEM151BQ8IW70 566 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 SRRM1Q8IYB3 904 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 PRSS58Q8IYP2 241 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ST13P4Q8IZP2 240 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 EID3Q8N140 333 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 TMEM151AQ8N4L1 468 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FAM26EQ8N5C1 309 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PTGR2Q8N8N7 351 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 Q8NA96 180 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CLEC18CQ8NCF0 446 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ST6GALNAC3Q8NDV1 305 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 NFAM1Q8NET5 270 aaPredicted RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 OR1N1Q8NGS0 311 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 HUS1BQ8NHY5 278 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FAM76AQ8TAV0 307 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FAR1Q8WVX9 515 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CAVIN3Q969G5 261 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ESAMQ96AP7 390 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 TMEM125Q96AQ2 219 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 C8orf44Q96CB5 159 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 SNRNP40Q96DI7 357 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 MRRFQ96E11 262 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 SGCZQ96LD1 299 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 FRG2BQ96QU4 278 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 F2RL3Q96RI0 385 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CCT7Q99832 543 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 MACROD1Q9BQ69 325 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ALOXE3Q9BYJ1 711 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 DEFB126Q9BYW3 111 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms