RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 OSMP13725 252 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CTGFP29279 349 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 GATMP50440 423 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 SNRPD1P62314 119 aaKnown RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 RACK1P63244 317 aaKnown RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 SEMG2Q02383 582 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 MLLT11Q13015 90 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 ILKQ13418 452 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 NAE1Q13564 534 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 ZMAT1Q5H9K5 638 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 RFLNAQ6ZTI6 216 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 TMEM173Q86WV6 379 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 VWA5B2Q8N398 1253 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 NANOGP1Q8N7R0 232 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 GDPD1Q8N9F7 314 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 OR4K1Q8NGD4 311 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 VANGL1Q8TAA9 524 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 BTN2A2Q8WVV5 523 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 DMRTB1Q96MA1 342 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 RIPOR3Q96MK2 946 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 SUV39H2Q9H5I1 410 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 STOX2Q9P2F5 926 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 HCSTQ9UBK5 93 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 RPL36Q9Y3U8 105 aaKnown RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CXorf51AA0A1B0GTR3 108 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CCDC182A6NF36 153 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 TPST2O60704 377 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 ALPPP05187 535 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 SOX3P41225 446 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 MLLT3P42568 568 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CLDN22Q8N7P3 220 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 GPR156Q8NFN8 814 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 ADAMTS19Q8TE59 1207 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 KIAA1143Q96AT1 154 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 REPS1Q96D71 796 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 MSLNLQ96KJ4 702 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 OR4K3Q96R72 315 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 UCK2Q9BZX2 261 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 MCOLN1Q9GZU1 580 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 RC3H2Q9HBD1 1191 aaKnown RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 GABRQQ9UN88 632 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 KLHL20Q9Y2M5 609 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CYP17A1P05093 508 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 PRKCAP17252 672 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 GNG2P59768 71 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 BNC1Q01954 994 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 SLAMF1Q13291 335 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 GANABQ14697 944 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 GPAT3Q53EU6 434 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 YIF1BQ5BJH7 314 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 C12orf73Q69YU5 71 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 SLC34A3Q8N130 599 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 BCL7CQ8WUZ0 217 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 SLC25A46Q96AG3 418 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 ARHGAP39Q9C0H5 1083 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 REV1Q9UBZ9 1251 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 MGAT4BQ9UQ53 548 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 NOTOA8MTQ0 251 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 A8MV72 311 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 RECKO95980 971 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 FURINP09958 794 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 CKMT1AP12532 417 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 RPL17P18621 184 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 POU1F1P28069 291 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 CHI3L1P36222 383 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 RPS13P62277 151 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 LMAN2Q12907 356 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 C1DQ13901 141 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 MED27Q6P2C8 311 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 UNC5DQ6UXZ4 953 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 MTERF3Q96E29 417 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 FAM83CQ9BQN1 747 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 TTYH2Q9BSA4 534 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 WRAP53Q9BUR4 548 aaKnown RBP16.84■□□□□ 0.29
SDCBP-202ENST00000413219 TIGARQ9NQ88 270 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 GULP1Q9UBP9 304 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 CLEC2DQ9UHP7 191 aa16.84■□□□□ 0.29
SDCBP-202ENST00000413219 SGTAO43765 313 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 CATP04040 527 aaKnown RBP16.83■□□□□ 0.28
SDCBP-202ENST00000413219 AZGP1P25311 298 aaKnown RBP16.83■□□□□ 0.28
SDCBP-202ENST00000413219 CASP9P55211 416 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 ARPC4P59998 168 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 OCLNQ16625 522 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 SLC5A12Q1EHB4 618 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 CYP27C1Q4G0S4 372 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 SLC35F1Q5T1Q4 408 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 ADNP2Q6IQ32 1131 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 FAM131AQ6UXB0 335 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 HSDL2Q6YN16 418 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 CCDC149Q6ZUS6 474 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF438Q7Z4V0 828 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 LIX1LQ8IVB5 337 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 BHMTQ93088 406 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 TRMT61AQ96FX7 289 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms