RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 POM121L1PQ3SYA9 428 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 GPAT3Q53EU6 434 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 PHYHD1Q5SRE7 291 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 FAM69BQ5VUD6 431 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CBLN3Q6UW01 205 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 FJX1Q86VR8 437 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 FAM228AQ86W67 206 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 SPATA2LQ8IUW3 424 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM139Q8IV31 216 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 UBQLNLQ8IYU4 475 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 LRRC43Q8N309 656 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 OR11H4Q8NGC9 324 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 OR52J3Q8NH60 311 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 PNPT1Q8TCS8 783 aaKnown RBP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 MIPOL1Q8TD10 442 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 SLC38A5Q8WUX1 472 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 SEPT8Q92599 483 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 OSTF1Q92882 214 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 PEX13Q92968 403 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 RASD2Q96D21 266 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 RAB39BQ96DA2 213 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 LRR1Q96L50 414 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CXorf58Q96LI9 332 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 USP28Q96RU2 1077 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 CCDC3Q9BQI4 270 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 ZMYND12Q9H0C1 365 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 SDCBP2Q9H190 292 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 MARCH7Q9H992 704 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 FN3KRPQ9HA64 309 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 NOX4Q9NPH5 578 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 NIP7Q9Y221 180 aaKnown RBP eCLIP4.14□□□□□ -1.75
BRCA1-204ENST00000412061 NCKAP1Q9Y2A7 1128 aa4.14□□□□□ -1.75
BRCA1-204ENST00000412061 A0A075B6Q4 140 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 LINC01553A4QN01 128 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 OR5K3A6NET4 321 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 CD8B2A6NJW9 211 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 C4orf47A7E2U8 309 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PRR32B1ATL7 298 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 CCL24O00175 119 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SDHDO14521 159 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GAPDHSO14556 408 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 CHEK1O14757 476 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ARPC2O15144 300 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SYT7O43581 403 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 KCNJ13O60928 360 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 UFL1O94874 794 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PAPSS2O95340 614 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GLUD1P00367 558 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 RAF1P04049 648 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 IGHV4-30-4P0DP06 118 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 F3P13726 295 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 HNF1AP20823 631 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 LMO1P25800 156 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GJB2P29033 226 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SFTPDP35247 375 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ANP32AP39687 249 aaKnown RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SLC6A8P48029 635 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GLUD2P49448 558 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PCYT1AP49585 367 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 THOP1P52888 689 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GEMP55040 296 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 CX3CL1P78423 397 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SRSF5Q13243 272 aaKnown RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SELPLGQ14242 412 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PHKG1Q16816 387 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 BCL7AQ4VC05 210 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SPDYCQ5MJ68 293 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ARMC12Q5T9G4 340 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 C20orf194Q5TEA3 1177 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 TAF3Q5VWG9 929 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 HIST2H2AA3Q6FI13 130 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 OR4A47Q6IF82 309 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 CTR9Q6PD62 1173 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PACS1Q6VY07 963 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 IL17RELQ6ZVW7 336 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PRUNE1Q86TP1 453 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF575Q86XF7 245 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PTOV1Q86YD1 416 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 DCLK2Q8N568 766 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF321PQ8N8H1 164 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF397Q8NF99 534 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 OR10Q1Q8NGQ4 319 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 SMG7Q92540 1137 aaKnown RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 MTBPQ96DY7 904 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM19Q96HH6 336 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 POLR3CQ9BUI4 534 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 TRAF4Q9BUZ4 470 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-204ENST00000412061 FUNDC2Q9BWH2 189 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 GANQ9H2C0 597 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 C5orf66Q9H5L9 145 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 RNF121Q9H920 327 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 MED20Q9H944 212 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PCDH9Q9HC56 1237 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 RNF14Q9UBS8 474 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 BCAP29Q9UHQ4 241 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 TEKT2Q9UIF3 430 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 KIAA1257Q9ULG3 409 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 PLCL2Q9UPR0 1127 aa4.13□□□□□ -1.75
BRCA1-204ENST00000412061 TEX13DA0A0J9YY54 714 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 A0A0U1RQS6 177 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms