RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 IL25Q9H293 177 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 A8MV72 311 aaPredicted RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ALDH2P05091 517 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SFTPBP07988 381 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ADRA1BP35368 520 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CLCN3P51790 818 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 GTF2A2P52657 109 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TREML1Q86YW5 311 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 OR4F6Q8NGB9 312 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SLC39A13Q96H72 371 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SH3YL1Q96HL8 342 aaPredicted RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ZNF599Q96NL3 588 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 MFFQ9GZY8 342 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 H0YGN5 161 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SCAMP1O15126 338 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 IFNGR1P15260 489 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 PPM1AP35813 382 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 BMXP51813 675 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 UBE2UQ5VVX9 321 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 GRIN3AQ8TCU5 1115 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ZNF382Q96SR6 550 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 NFS1Q9Y697 457 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 PRSS51A0A1B0GVH4 220 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 EPHB6O15197 1021 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ASPAP45381 313 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 RPS3AP61247 264 aaKnown RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 RAB30Q15771 203 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 BATFQ16520 125 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ENPP7Q6UWV6 458 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 IGFN1Q86VF2 1251 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SUSD6Q92537 303 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 MAGEH1Q9H213 219 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 POLE4Q9NR33 117 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 NDOR1Q9UHB4 597 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TXNL1O43396 289 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 AHSA1O95433 338 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ADORA2AP29274 412 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TMEM62Q0P6H9 643 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 GALNT1Q10472 559 aaPredicted RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TATDN3Q17R31 274 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CCDC120Q96HB5 630 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 EQTNQ9NQ60 294 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 C3P01024 1663 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SLC35F4A4IF30 521 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SMLR1H3BR10 107 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TOXO94900 526 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ENGP17813 658 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 THPOP40225 353 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 FRG2Q64ET8 278 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 OR4K2Q8NGD2 314 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SLC22A18Q96BI1 424 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 FRG2BQ96QU4 278 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ALX3O95076 343 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 RNH1P13489 461 aaKnown RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CA5AP35218 305 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 KANSL1Q7Z3B3 1105 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SLC35F3Q8IY50 421 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TEX19Q8NA77 164 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 B3GAT2Q9NPZ5 323 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CLDN24A6NM45 220 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 B3GALT2O43825 422 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TYROBPO43914 113 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 TOX4O94842 621 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SCGB1D1O95968 90 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 LALBAP00709 142 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 MAGEA11P43364 429 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 HTD2P86397 168 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 CDK6Q00534 326 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 SLC2A7Q6PXP3 512 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 ADAD1Q96M93 576 aaKnown RBP12.45□□□□□ -0.42
COL6A3-206ENST00000409809 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
COL6A3-206ENST00000409809 A0A1W2PQL4 384 aaPredicted RBP12.44□□□□□ -0.42
COL6A3-206ENST00000409809 PCDH7O60245 1069 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 SDC3O75056 442 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 SH3BGRLO75368 114 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 IL1AP01583 271 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 ITGA5P08648 1049 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 CALCRP30988 508 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 EPHX2P34913 555 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 AWAT2Q6E213 333 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 LPCAT3Q6P1A2 487 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 PTCHD1Q96NR3 888 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 NPLQ9BXD5 320 aaPredicted RBP12.44□□□□□ -0.42
COL6A3-206ENST00000409809 FBXL4Q9UKA2 621 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 A0A0U1RQJ8 604 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 H3BRB1 525 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 HCKP08631 526 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 UGT2B7P16662 529 aa12.44□□□□□ -0.42
COL6A3-206ENST00000409809 TUT1Q9H6E5 874 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms