RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MAP3K8P41279 467 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LEPRP48357 1165 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CACNA2D1P54289 1103 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NIPAL4Q0D2K0 466 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SMCO1Q147U7 214 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NNATQ16517 81 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 METTL21CQ5VZV1 264 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LIN54Q6MZP7 749 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ANKRD26P1Q6NSI1 321 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 HSDL2Q6YN16 418 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 GPR65Q8IYL9 337 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ARL10Q8N8L6 244 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DDHD1Q8NEL9 900 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 PJA1Q8NG27 643 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR52E1Q8NGJ3 308 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR5AR1Q8NGP9 310 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NAT14Q8WUY8 206 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SOX17Q9H6I2 414 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BRD7Q9NPI1 651 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 MCTS1Q9ULC4 181 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SPEF1Q9Y4P9 236 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TRBC2A0A5B9 178 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DAPL1A0PJW8 107 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZBTB42B2RXF5 422 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SGK494L7N484 410 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SNX3O60493 162 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 WBP4O75554 376 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 PDYNP01213 254 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF888P0CJ79 500 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLC6A6P31641 620 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 FAUP35544 74 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 EIF2DP41214 584 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NOVA1P51513 510 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CDK6Q00534 326 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ABHD18Q0P651 414 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 MERTKQ12866 999 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C5orf22Q49AR2 442 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NKAIN2Q5VXU1 208 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ENPP6Q6UWR7 440 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C6orf15Q6UXA7 325 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZDHHC21Q8IVQ6 265 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 PGAM4Q8N0Y7 254 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CBARPQ8N350 705 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LINC00471Q8N535 108 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF611Q8N823 705 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 YIPF7Q8N8F6 280 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR2L2Q8NH16 312 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ADAMTS19Q8TE59 1207 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BORCS6Q96GS4 357 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ASB16Q96NS5 453 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 UTP23Q9BRU9 249 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ALOXE3Q9BYJ1 711 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 FOXQ1Q9C009 403 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BRF2Q9HAW0 419 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C8orf4Q9NR00 106 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TVP23BQ9NYZ1 205 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 COMMD9Q9P000 198 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 MYH1P12882 1939 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 A0A075B6Q4 140 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR52A4PA6NMU1 304 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLC22A2O15244 555 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SMAD6O43541 496 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SIGLEC6O43699 453 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 KCNK5O95279 499 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 HSD3B1P14060 373 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NCK1P16333 377 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 HSD3B2P26439 372 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 GBX2P52951 348 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 RIPK1Q13546 671 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LIPIQ6XZB0 460 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 KLHDC8AQ8IYD2 350 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ALDH16A1Q8IZ83 802 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BANPQ8N9N5 519 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NKD1Q969G9 470 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CHFRQ96EP1 664 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 POLDIP3Q9BY77 421 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 AKTIPQ9H8T0 292 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CDH20Q9HBT6 801 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 PCDHB16Q9NRJ7 776 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CUTCQ9NTM9 273 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DKK3Q9UBP4 350 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SALL4Q9UJQ4 1053 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BOKQ9UMX3 212 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM5Q9Y2B1 443 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CHD4Q14839 1912 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CACNG3O60359 315 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CSTBP04080 98 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 H1F0P07305 194 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 F3P13726 295 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CNR2P34972 360 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 VASPP50552 380 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 VBP1P61758 197 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TAB1Q15750 504 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 PKDCCQ504Y2 493 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR8K5Q8NH50 307 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LTB4R2Q9NPC1 389 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms