RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MRM1Q6IN84 353 aaKnown RBP27.69■■■□□ 2.02
USP42-202ENST00000404008 CYP20A1Q6UW02 462 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 SHISA6Q6ZSJ9 500 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 CRLF3Q8IUI8 442 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 TBC1D20Q96BZ9 403 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 C3orf30Q96M34 536 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 MAPKAP1Q9BPZ7 522 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 RBCK1Q9BYM8 510 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 PFDN4Q9NQP4 134 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 SIRT5Q9NXA8 310 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 MARCOQ9UEW3 520 aaPredicted RBP27.69■■■□□ 2.02
USP42-202ENST00000404008 ZZEF1O43149 2961 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 A0A087WV48 116 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 LSM1O15116 133 aaKnown RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 JRKO75564 520 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 WT1P19544 449 aaPredicted RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 RAB38P57729 211 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 RAE1P78406 368 aaKnown RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 KLC1Q07866 573 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 NR6A1Q15406 480 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 LRRC69Q6ZNQ3 347 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 LAPTM4BQ86VI4 370 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 PIWIL2Q8TC59 973 aaKnown RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 METTL2AQ96IZ6 378 aaKnown RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 SLC45A3Q96JT2 553 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 LANCL2Q9NS86 450 aa27.68■■■□□ 2.02
USP42-202ENST00000404008 LYARQ9NX58 379 aaKnown RBP27.68■■■□□ 2.02
USP42-202ENST00000404008 FHP07954 510 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 FAM58BPP0C7Q3 252 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 KITP10721 976 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 FOLR3P41439 243 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 GUCY1A3Q02108 690 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 TLE3Q04726 772 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 ERV3-1Q14264 604 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 CCNYL2Q5T2Q4 361 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 GALNT18Q6P9A2 607 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 MED25Q71SY5 747 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 PRSS58Q8IYP2 241 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 ADAMTS18Q8TE60 1221 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 STARD8Q92502 1023 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 LRTM1Q9HBL6 345 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 C1orf109Q9NX04 203 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 FBXW2Q9UKT8 454 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 ASB4Q9Y574 426 aa27.67■■■□□ 2.02
USP42-202ENST00000404008 URB1O60287 2271 aaKnown RBP27.67■■■□□ 2.02
USP42-202ENST00000404008 ACACBO00763 2458 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 ATP6AP2A0A1C7CYW4 349 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 ARHGAP10A1A4S6 786 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 FAM227AF5H4B4 570 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 PSMD12O00232 456 aaPredicted RBP27.66■■■□□ 2.02
USP42-202ENST00000404008 EFSO43281 561 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 CREG1O75629 220 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 ATP6AP2O75787 350 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 UMODP07911 640 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 HNRNPH2P55795 449 aaKnown RBP27.66■■■□□ 2.02
USP42-202ENST00000404008 KIAA0040Q15053 153 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 GPR180Q86V85 440 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 CSF3RQ99062 836 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 NUF2Q9BZD4 464 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 RIC8BQ9NVN3 520 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 VTI1BQ9UEU0 232 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 PHF11Q9UIL8 331 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 MCM8Q9UJA3 840 aa27.66■■■□□ 2.02
USP42-202ENST00000404008 SLCO1B7G3V0H7 640 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 CYR61O00622 381 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 HDAC3O15379 428 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 PCDH7O60245 1069 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 SEC22BO75396 215 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 TIA1P31483 386 aaKnown RBP eCLIP27.65■■■□□ 2.02
USP42-202ENST00000404008 MDH1P40925 334 aaKnown RBP27.65■■■□□ 2.02
USP42-202ENST00000404008 HK2P52789 917 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 FAM47EQ6ZV65 393 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 WDR75Q8IWA0 830 aaKnown RBP27.65■■■□□ 2.02
USP42-202ENST00000404008 FAM47BQ8NA70 645 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 MS4A12Q9NXJ0 267 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 MKL2Q9ULH7 1088 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 ATG4BQ9Y4P1 393 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 SPACA6W5XKT8 324 aa27.65■■■□□ 2.02
USP42-202ENST00000404008 TCP11X1B4DZS4 312 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 CDC123O75794 336 aaPredicted RBP27.64■■■□□ 2.02
USP42-202ENST00000404008 JAK1P23458 1154 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 EFNA3P52797 238 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 MAPK12P53778 367 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 IL10RAQ13651 578 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 TUBB8Q3ZCM7 444 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 GALNTL6Q49A17 601 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 MINDY4Q4G0A6 757 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 BROXQ5VW32 411 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 EFCAB3Q8N7B9 438 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 PPP1R36Q96LQ0 422 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 PPP3R2Q96LZ3 170 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 CRB3Q9BUF7 120 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 MEAF6Q9HAF1 191 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 GIMAP2Q9UG22 337 aa27.64■■■□□ 2.02
USP42-202ENST00000404008 IDSB3KWA1 339 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 PROM1O43490 865 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 CPN2P22792 545 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 ITPKBP27987 946 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 TNFRSF17Q02223 184 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 ATP6AP1LQ52LC2 224 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms