RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 DEFA1P59665 94 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 DEFA3P59666 94 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 LIPKQ5VXJ0 399 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 RD3Q7Z3Z2 195 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 OR8J2Q8NGG1 315 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 APH1BQ8WW43 257 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 PPP1R14BQ96C90 147 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 REPS1Q96D71 796 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 MROQ9BYG7 248 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 POLR2J2Q9GZM3 115 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 MRPS23Q9Y3D9 190 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 FHP07954 510 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 SPNP16150 400 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 ITGA2P17301 1181 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 PPIBP23284 216 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 GGT2P36268 569 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 RAE1P78406 368 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 GRHL2Q6ISB3 625 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 WDR53Q7Z5U6 358 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CYP4Z2PQ8N1L4 340 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 DNAJC22Q8N4W6 341 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 STARD8Q92502 1023 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 YIPF6Q96EC8 236 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 C1GALT1C1Q96EU7 318 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 C7orf34Q96L11 122 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 POLR2J3Q9H1A7 115 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 NMNAT1Q9HAN9 279 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 M0R3H8 397 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CTSLP07711 333 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 ADORA3P0DMS8 318 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 LAG3P18627 525 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 DGKGP49619 791 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 DCST1Q5T197 706 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 LIPIQ6XZB0 460 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC5A11Q8WWX8 675 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CNDP2Q96KP4 475 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 RETREG1Q9H6L5 497 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 ANKRA2Q9H9E1 313 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 M0R082 166 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 MYL12BO14950 172 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SSX4O60224 188 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 ENTPD6O75354 484 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 NPPBP16860 134 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC16A1P53985 500 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 ZC3H12BQ5HYM0 836 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SLCO4C1Q6ZQN7 724 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 CCDC149Q6ZUS6 474 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 C17orf64Q86WR6 236 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SYNPOQ8N3V7 929 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 KAT2AQ92830 837 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SLIRPQ9GZT3 109 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 CORO2BQ9UQ03 480 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 IFT52Q9Y366 437 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 KRT75O95678 551 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 RHOP08100 348 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SYN1P17600 705 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SSTR4P31391 388 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 HOXC5Q00444 222 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 MESP2Q0VG99 397 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 MICAQ29983 383 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 SMU1Q2TAY7 513 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 HRASLS5Q96KN8 279 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 QRSL1Q9H0R6 528 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 CUEDC1Q9NWM3 386 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 FBXW2Q9UKT8 454 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 OR12D1P0DN82 309 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 MAGEA2P43356 314 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 DMPKQ09013 629 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 KCNJ8Q15842 424 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PRAMEF14Q5SWL7 426 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PRAMEF13Q5VWM6 474 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms