RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 GALNT7Q86SF2 657 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 TMPRSS11BQ86T26 416 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 DOLPP1Q86YN1 238 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 CHERPQ8IWX8 916 aaKnown RBP9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 LGI4Q8N135 537 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 GHDCQ8N2G8 530 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 NFAM1Q8NET5 270 aaPredicted RBP9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 FAM45AQ8TCE6 357 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 ATL1Q8WXF7 558 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 SMIM10Q96HG1 83 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 AIF1LQ9BQI0 150 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 WDR83Q9BRX9 315 aaKnown RBP9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 DEFB126Q9BYW3 111 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 PELI2Q9HAT8 420 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 ITGB1BP2Q9UKP3 347 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 SLC22A14Q9Y267 594 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 ASB1Q9Y576 335 aa9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 SETD2Q9BYW2 2564 aaPredicted RBP9.16□□□□□ -0.94
NIFKP1-201ENST00000398317 HCFC1P51610 2035 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 IGKV3D-11A0A0A0MRZ8 115 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 TRBV11-1A0A0K0K1C0 115 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 TCRBV16S1A1N1A0A5B0 115 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 URADA6NGE7 173 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 ADAM10O14672 748 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 MYO1DO94832 1006 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 ENO2P09104 434 aaPredicted RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 IVDP26440 423 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 MEOX1P50221 254 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 HLCSP50747 726 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 KRTAP10-9P60411 292 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 BTN3A2P78410 334 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 RUNX2Q13950 521 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 PPP1R3AQ16821 1122 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 C18orf21Q32NC0 220 aaPredicted RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 NIPAL1Q6NVV3 410 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 SULF2Q8IWU5 870 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 CA13Q8N1Q1 262 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 TRPV3Q8NET8 790 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 CREB3L4Q8TEY5 395 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 TMEM125Q96AQ2 219 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 PDLIM5Q96HC4 596 aaKnown RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 NAT9Q9BTE0 207 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 TRIM45Q9H8W5 580 aaPredicted RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 PNO1Q9NRX1 252 aaKnown RBP9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 FBXW2Q9UKT8 454 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 SNX12Q9UMY4 172 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 PSAT1Q9Y617 370 aa9.15□□□□□ -0.94
NIFKP1-201ENST00000398317 MAP1AP78559 2803 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 A0A1B0GTH9 108 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 MYOCOSA0A1B0GUC4 107 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 FCHO1O14526 889 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 PRRG2O14669 202 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 TFECO14948 347 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 HS6ST1O60243 411 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 CDC40O60508 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 SERPINA6P08185 405 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 ZNF37AP17032 561 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 PPP2R1BP30154 601 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 TRHRP34981 398 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 GDF5P43026 501 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 GATA4P43694 442 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 HNRNPFP52597 415 aaKnown RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 GPR85P60893 370 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 STEAP4Q687X5 459 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 PDIK1LQ8N165 341 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 TMEM156Q8N614 296 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 APCDD1LQ8NCL9 501 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 TMEM52Q8NDY8 209 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 CCT6BQ92526 530 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 SDCCAG3Q96C92 435 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 DMRTA2Q96SC8 542 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 EGFL8Q99944 293 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 LIN28AQ9H9Z2 209 aaKnown RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 CLK4Q9HAZ1 481 aaKnown RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 ZNF223Q9UK11 482 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 CORO1CQ9ULV4 474 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 KLF13Q9Y2Y9 288 aaPredicted RBP9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 TEX264Q9Y6I9 313 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 KCNE2Q9Y6J6 123 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 NINQ8N4C6 2090 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 AKAP6Q13023 2319 aa9.14□□□□□ -0.95
NIFKP1-201ENST00000398317 FREM3P0C091 2139 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 FAM95CA0A1B0GW59 222 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 NCF1BA6NI72 391 aaPredicted RBP9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 NCF1CA8MVU1 366 aaPredicted RBP9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 E9PLN8 166 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 KLRC4-KLRK1H3BQV0 150 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 LINC01387J3KSC0 135 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 ERI3O43414 337 aaKnown RBP9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 PEX1O43933 1283 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 PRKNO60260 465 aaPredicted RBP9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 H2AFYO75367 372 aaKnown RBP9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 ITGA10O75578 1167 aa9.13□□□□□ -0.95
NIFKP1-201ENST00000398317 SMNDC1O75940 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms