RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PTGDR2Q9Y5Y4 395 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 LRP6O75581 1613 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 MYH1P12882 1939 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RTCAO00442 366 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 RPS15AP62244 130 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 ZNF678Q5SXM1 525 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 ASB15Q8WXK1 588 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 NSMAFQ92636 917 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 KCNJ9Q92806 393 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 GPR22Q99680 433 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 WDR6Q9NNW5 1121 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 PPP1R3AQ16821 1122 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TMEM234Q8WY98 164 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RBP7Q96R05 134 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 SLC16A5O15375 505 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 HK1P19367 917 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 GSTM3P21266 225 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 GJA5P36382 358 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 RING1Q06587 406 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ALPK1Q96QP1 1244 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 REEP4Q9H6H4 257 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 GJD2Q9UKL4 321 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ARG2P78540 354 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 DSG2Q14126 1118 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 OR2T5Q6IEZ7 315 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 NIPAL1Q6NVV3 410 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 OR2T29Q8NH02 315 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FCRL3Q96P31 734 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 TSSK6Q9BXA6 273 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 MRM3Q9HC36 420 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 MS4A12Q9NXJ0 267 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 TEX264Q9Y6I9 313 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 COL2A1P02458 1487 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 C4BP0C0L5 1744 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 CNMDO75829 334 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 HTR1AP08908 422 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FGL2Q14314 439 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 MAD2L1BPQ15013 274 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 PRAMEF17Q5VTA0 474 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 IGDCC3Q8IVU1 814 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 CANT1Q8WVQ1 401 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 NLGN3Q9NZ94 848 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PRKACGP22612 351 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 Q6ZSR6 202 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PEX14O75381 377 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ANXA8P13928 327 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 HOXA11P31270 313 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 XIAPP98170 497 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 CDKN3Q16667 212 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PYHIN1Q6K0P9 492 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 CCDC80Q76M96 950 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 TMEM41AQ96HV5 264 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 LRIG1Q96JA1 1093 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 WASF3Q9UPY6 502 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 POFUT2Q9Y2G5 429 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 GSTT2BP0CG30 244 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 BTBD16Q32M84 506 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ALG10Q5BKT4 473 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ABHD17BQ5VST6 288 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 LIX1LQ8IVB5 337 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 LRRC25Q8N386 305 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 MCOLN1Q9GZU1 580 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PCDHGB1Q9Y5G3 927 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 MAFKO60675 156 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 P2RY2P41231 377 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 GBX1Q14549 363 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 KHDC1Q4VXA5 237 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 TMEM17Q86X19 198 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 CLEC1AQ8NC01 280 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FAM129BQ96TA1 746 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 XYLT2Q9H1B5 865 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 TMEM185BQ9H7F4 350 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 OARD1Q9Y530 152 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ACOT7O00154 380 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PEPDP12955 493 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 IRF2P14316 349 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ZNF234Q14588 700 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 OR8S1Q8NH09 359 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 AURKBQ96GD4 344 aaPredicted RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 MCHR1Q99705 422 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PMM2O15305 246 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 PRSS56P0CW18 603 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 RORCP51449 518 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 RPS3AP61247 264 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 ZDHHC24Q6UX98 284 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FAM86B1Q8N7N1 296 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FAM120CQ9NX05 1096 aaKnown RBP10.91□□□□□ -0.66
TTC28-201ENST00000397906 ZIM2Q9NZV7 527 aa10.91□□□□□ -0.66
TTC28-201ENST00000397906 FOLR3P41439 243 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 GPX6P59796 221 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PCLAFQ15004 111 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 GXYLT1Q4G148 440 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 IER5LQ5T953 404 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms