RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NSDHLQ15738 373 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 QSOX2Q6ZRP7 698 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ANKRD37Q7Z713 158 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 NUDT13Q86X67 352 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 PLPP5Q8NEB5 264 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SLC39A7Q92504 469 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 MAPKAP1Q9BPZ7 522 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SEMA4CQ9C0C4 833 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 BRF2Q9HAW0 419 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TMBIM4Q9HC24 238 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ZNF160Q9HCG1 818 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 KCNK9Q9NPC2 374 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ATP13A2Q9NQ11 1180 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TUBD1Q9UJT1 453 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 MRPS33Q9Y291 106 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SPTA1P02549 2419 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 IGHV1-45A0A0A0MS14 117 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 NSG1A0A0A6YYJ2 146 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 A0A1W2PQ72 361 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 A6NL46 340 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TM9SF1O15321 606 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 PRMT3O60678 531 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ULK1O75385 1050 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 EEDO75530 441 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 CRCPO75575 148 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 MAOAP21397 527 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 BSGP35613 385 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 HNRNPFP52597 415 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 AIMP2Q13155 320 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SLAMF1Q13291 335 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 PCOLCEQ15113 449 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SOWAHCQ53LP3 525 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ZCCHC23Q6ZST2 131 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 NDUFAF7Q7L592 441 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ZCCHC7Q8N3Z6 543 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 EFCAB3Q8N7B9 438 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TMEM52Q8NDY8 209 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 C9orf43Q8TAL5 461 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SREK1Q8WXA9 508 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 ABHD17AQ96GS6 310 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 CNDP1Q96KN2 507 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 PKNOX2Q96KN3 472 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 PTCHD1Q96NR3 888 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TRMOQ9BU70 441 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 MRPL1Q9BYD6 325 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 TNFRSF12AQ9NP84 129 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 RIC8BQ9NVN3 520 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 KCMF1Q9P0J7 381 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 FBXW2Q9UKT8 454 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 MMACHCQ9Y4U1 282 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 SPACA6W5XKT8 324 aa19.93■□□□□ 0.78
TSPAN4-206ENST00000397408 BOD1L1Q8NFC6 3051 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 IGHV3-20A0A0C4DH32 117 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 CYR61O00622 381 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 HSD3B1P14060 373 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 HSD3B2P26439 372 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 SERPINB4P48594 390 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 CSTF3Q12996 717 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 RAPSNQ13702 412 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 CPEB2Q7Z5Q1 589 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 GALNT16Q8N428 558 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 FDCSPQ8NFU4 85 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 SLC25A23Q9BV35 468 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 ZNF700Q9H0M5 742 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 DDX31Q9H8H2 851 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 NECTIN3Q9NQS3 549 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 PRDM9Q9NQV7 894 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 PRTFDC1Q9NRG1 225 aa19.92■□□□□ 0.78
TSPAN4-206ENST00000397408 A0A0A6YYD5 115 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 TMPRSS11DO60235 418 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 NPHS1O60500 1241 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 CEACAM4O75871 244 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 SEC24DO94855 1032 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 ZWINTO95229 277 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 SFTPCP11686 197 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 CPN2P22792 545 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 ITGA3P26006 1051 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 MAGOHP61326 146 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 MPP2Q14168 576 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 SCIMPQ6UWF3 145 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 CUZD1Q86UP6 607 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 SCUBE1Q8IWY4 988 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 PARP9Q8IXQ6 854 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 ZNF595Q8IYB9 648 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 METTL4Q8N3J2 472 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 TLCD1Q96CP7 247 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 ACPTQ9BZG2 426 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 GPR83Q9NYM4 423 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 AHSPQ9NZD4 102 aa19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 G3BP2Q9UN86 482 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-206ENST00000397408 IGKV3D-11A0A0A0MRZ8 115 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 CLDN4O14493 209 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 GBAP04062 536 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 CHRNGP07510 517 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 CHN1P15882 459 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 HNRNPH2P55795 449 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 HSD17B7P56937 341 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 OR4D2P58180 307 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 ZNF33BQ06732 778 aa19.9■□□□□ 0.78
TSPAN4-206ENST00000397408 Q0VFX4 171 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms