RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PPP1R8Q12972 351 aaKnown RBP16.79■□□□□ 0.28
MCF2L-208ENST00000397030 SLC36A4Q6YBV0 504 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 EID2Q8N6I1 236 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.79■□□□□ 0.28
MCF2L-208ENST00000397030 SLC25A44Q96H78 314 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-208ENST00000397030 IL20RAQ9UHF4 553 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 M0R036 132 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 NUDT6P53370 316 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 QPCTQ16769 361 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 TRIM73Q86UV7 250 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 MATN2O00339 956 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
MCF2L-208ENST00000397030 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 FIGNL1Q6PIW4 674 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 TMEM248Q9NWD8 314 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 OR1E2P47887 323 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 GAS6Q14393 721 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 CDKN3Q16667 212 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF572Q7Z3I7 529 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-208ENST00000397030 OR8H3Q8N146 312 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 TBC1D15Q8TC07 691 aa16.79■□□□□ 0.28
MCF2L-208ENST00000397030 TCRBV7S3A2A0A539 114 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 TLX2O43763 284 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SOX30O94993 753 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF28P17035 718 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 CXCL12P48061 93 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 JAM2P57087 298 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 UFM1P61960 85 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 UBE2UQ5VVX9 321 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 PRR22Q8IZ63 422 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 OTUB2Q96DC9 234 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 DYNLRB1Q9NP97 96 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 VSTM2BA6NLU5 285 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 GPIP06744 558 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 MAOBP27338 520 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SHKBP1Q8TBC3 707 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ANKRD34BA5PLL1 514 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 OR5K4A6NMS3 321 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 RAB36O95755 333 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 C6P13671 934 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 HERC3Q15034 1050 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 UPP1Q16831 310 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 FUKQ8N0W3 1084 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 PCDHAC1Q9H158 963 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SRA1Q9HD15 236 aaKnown RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 TRIM36Q9NQ86 728 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF180Q9UJW8 692 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 RRP8O43159 456 aaKnown RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 DCKP27707 260 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 GCH1P30793 250 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SHC2P98077 582 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 EEF1A2Q05639 463 aaKnown RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 FRMD7Q6ZUT3 714 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF808Q8N4W9 903 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 PCDHGA2Q9Y5H1 932 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 A0A1W2PPK0 400 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SSX5O60225 188 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 TRMUO75648 421 aaKnown RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ARSAP15289 507 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 SLC15A1P46059 708 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF550Q7Z398 422 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 NANOS1Q8WY41 292 aaKnown RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 TM9SF4Q92544 642 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 NECAB3Q96P71 396 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-208ENST00000397030 MCHR1Q99705 422 aa16.78■□□□□ 0.28
MCF2L-208ENST00000397030 NARSO43776 548 aaKnown RBP16.77■□□□□ 0.28
MCF2L-208ENST00000397030 GSTM3P21266 225 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 LRFN4Q6PJG9 635 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 NTAN1Q96AB6 310 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 DDIT4LQ96D03 193 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 ERMAPQ96PL5 475 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-208ENST00000397030 IL1R2P27930 398 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 KCNC4Q03721 635 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 ELP5Q8TE02 316 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 FBRSQ9HAH7 460 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 LOC102723532A0A0G2JNH3 316 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 NAA10P41227 235 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-208ENST00000397030 ABRAXAS2Q15018 415 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 XKRXQ6PP77 449 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 HACD2Q6Y1H2 254 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 USP43Q70EL4 1123 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 RAB7BQ96AH8 199 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 S100PBPQ96BU1 408 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 NEDD4LQ96PU5 975 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 CD244Q9BZW8 370 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 ZNF442Q9H7R0 627 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 DNAJB9Q9UBS3 223 aa16.77■□□□□ 0.28
MCF2L-208ENST00000397030 MROH2AA6NES4 1674 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-208ENST00000397030 M0QX08 132 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 CER1O95813 267 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 AGTR2P50052 363 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 MPP2Q14168 576 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 SH3D19Q5HYK7 790 aa16.77■□□□□ 0.27
MCF2L-208ENST00000397030 PAMR1Q6UXH9 720 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms