RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NAXEQ8NCW5 288 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 OR52N1Q8NH53 320 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 UFD1Q92890 307 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 INTS12Q96CB8 462 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 NT5C1AQ9BXI3 368 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ASB7Q9H672 318 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 FBXO8Q9NRD0 319 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TAS2R16Q9NYV7 291 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ABCD2Q9UBJ2 740 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PLEKHA6Q9Y2H5 1048 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PCDHGA2Q9Y5H1 932 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TPRP12270 2363 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 TSC2P49815 1807 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 METTL15A6NJ78 407 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DPYSL4O14531 572 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF197O14709 1029 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DCLK1O15075 740 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 IPO13O94829 963 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 JCHAINP01591 159 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RAF1P04049 648 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 UMPSP11172 480 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RHCEP18577 417 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GABRB3P28472 473 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GNALP38405 381 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 KCNQ1P51787 676 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DIO3P55073 304 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF273Q14593 569 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 NFATC4Q14934 902 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MARCH8Q5T0T0 291 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 AVPI1Q5T686 147 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SFRP4Q6FHJ7 346 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 C3orf33Q6P1S2 294 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GALNT10Q86SR1 603 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TMEM17Q86X19 198 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RELL2Q8NC24 303 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 SFXN2Q96NB2 322 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DPY30Q9C005 99 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DNTTIP1Q9H147 329 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SMOC2Q9H3U7 446 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 METTL17Q9H7H0 456 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CLN6Q9NWW5 311 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SPTBN2O15020 2390 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CHD5Q8TDI0 1954 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CD3EAPO15446 510 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 LCMT2O60294 686 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 DLX3O60479 287 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 EGFP01133 1207 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PIM1P11309 404 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 UGT2B7P16662 529 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ARRB2P32121 409 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RAB13P51153 203 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 LIMK1P53667 647 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PER3P56645 1201 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OR2B8PP59922 312 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RBP5P82980 135 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 BCL2L1Q07817 233 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 KYAT1Q16773 422 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PDSS1Q5T2R2 415 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ADAM5Q6NVV9 412 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MZT2AQ6P582 158 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OR6S1Q8NH40 331 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 HTR3CQ8WXA8 447 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 C18orf25Q96B23 403 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 SPSB2Q99619 263 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CCM2Q9BSQ5 444 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PAPOLGQ9BWT3 736 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 NKX6-2Q9C056 277 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TPT1P8Q9HAU6 139 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ACOT13Q9NPJ3 140 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OAS3Q9Y6K5 1087 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 TCRBV3S1A0A5B6 114 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 FAM159BA6NKW6 160 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 B4DXG7 233 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SDHDO14521 159 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZBTB24O43167 697 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 LRATO95237 230 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GRK5P34947 590 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 AVPR1BP47901 424 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CASP9P55211 416 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CDC42P60953 191 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PITX1P78337 314 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 CTAG1AP78358 180 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TRAM1Q15629 374 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RAET1GQ6H3X3 334 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms