RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 PNPLA2Q96AD5 504 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 RGMAQ96B86 450 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 LMF1Q96S06 567 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 WDR77Q9BQA1 342 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 PRR14Q9BWN1 585 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ERVK-6Q9BXR3 956 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 EPN3Q9H201 632 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ZBTB26Q9HCK0 441 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 LYRM4Q9HD34 91 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.04□□□□□ -1.12
APLF-202ENST00000394342 MRPS33Q9Y291 106 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 RNF11Q9Y3C5 154 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 V9GYY5 206 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 ICE1Q9Y2F5 2266 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 NBPF19A0A087WUL8 3843 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 IGKV3D-11A0A0A0MRZ8 115 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 A0A1W2PPM1 405 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 TCRBV16S1A1N1A0A5B0 115 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 OR2W5A6NFC9 320 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SMIM23A6NLE4 172 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 FAM227AF5H4B4 570 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 J3QKU1 62 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 DLX3O60479 287 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 B4GALT2O60909 372 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SEC24DO94855 1032 aaPredicted RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 SORBS2O94875 1100 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 TGFB1P01137 390 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 TUBBP07437 444 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 IMPDH1P20839 514 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 HIST1H1TP22492 207 aaPredicted RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 ATP5A1P25705 553 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 CRHR1P34998 444 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SOX11P35716 441 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SSR2P43308 183 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 CCT5P48643 541 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 RAP1GDS1P52306 607 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 PRKAA2P54646 552 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 HSD17B7P56937 341 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 OR4D2P58180 307 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 NAA20P61599 178 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 RPS13P62277 151 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 CLCQ05315 142 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 IFT88Q13099 833 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 MFAP5Q13361 173 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 CUL3Q13618 768 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ZRSR2Q15696 482 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 ERCC6LQ2NKX8 1250 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 AP5B1Q2VPB7 878 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 CCDC153Q494R4 210 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 NADK2Q4G0N4 442 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ZNF678Q5SXM1 525 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 FRG2Q64ET8 278 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SLC6A19Q695T7 634 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 OR4C11Q6IEV9 310 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 PAPD4Q6PIY7 484 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 ZNF793Q6ZN11 406 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 MILR1Q7Z6M3 343 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SCUBE1Q8IWY4 988 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 CYP4X1Q8N118 509 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ZADH2Q8N4Q0 377 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 MREGQ8N565 214 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ACOT4Q8N9L9 421 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 OR52B6Q8NGF0 335 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 M1APQ8TC57 530 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 PPP4R1Q8TF05 950 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 CCDC126Q96EE4 140 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 L3HYPDHQ96EM0 354 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 PTCHD1Q96NR3 888 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 NSUN5Q96P11 429 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 TMEM237Q96Q45 408 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 FRG2BQ96QU4 278 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 MTERF1Q99551 399 aaKnown RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 SERPINI1Q99574 410 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 LPAR4Q99677 370 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ROPN1BQ9BZX4 212 aaPredicted RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 OR51B5Q9H339 312 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 EPS8L2Q9H6S3 715 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 ROPN1Q9HAT0 212 aaPredicted RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 MMP25Q9NPA2 562 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SEMA4BQ9NPR2 832 aaPredicted RBP8.03□□□□□ -1.12
APLF-202ENST00000394342 TRPS1Q9UHF7 1281 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 RAB21Q9UL25 225 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 EMCNQ9ULC0 261 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 GRID1Q9ULK0 1009 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 DAPP1Q9UN19 280 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 STK38LQ9Y2H1 464 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 SPACA6W5XKT8 324 aa8.03□□□□□ -1.12
APLF-202ENST00000394342 NCKAP5O14513 1909 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 IGHV3-20A0A0C4DH32 117 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 SAGE2PA6NJ88 616 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 RTCAO00442 366 aaKnown RBP8.02□□□□□ -1.13
APLF-202ENST00000394342 CYR61O00622 381 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 CLDN4O14493 209 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 PLPP1O14494 284 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 COPEO14579 308 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 SH3BGRLO75368 114 aa8.02□□□□□ -1.13
APLF-202ENST00000394342 SUPT7LO94864 414 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms