RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LANCL3Q6ZV70 420 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 APLFQ8IW19 511 aaPredicted RBP18.27■□□□□ 0.51
GTF3A-201ENST00000381140 TRIM42Q8IWZ5 723 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 ACOT4Q8N9L9 421 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 FAM47BQ8NA70 645 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 CLEC1AQ8NC01 280 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 OR11G2Q8NGC1 345 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 RAB3IL1Q8TBN0 382 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 METTL6Q8TCB7 284 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 VPS50Q96JG6 964 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 KCNA7Q96RP8 456 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 SERPINI1Q99574 410 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 NPLQ9BXD5 320 aaPredicted RBP18.27■□□□□ 0.51
GTF3A-201ENST00000381140 CLK4Q9HAZ1 481 aaKnown RBP18.27■□□□□ 0.51
GTF3A-201ENST00000381140 LANCL2Q9NS86 450 aa18.27■□□□□ 0.51
GTF3A-201ENST00000381140 FOXE1O00358 373 aaPredicted RBP18.26■□□□□ 0.51
GTF3A-201ENST00000381140 MANBAO00462 879 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 PLPP1O14494 284 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 UBFD1O14562 309 aaKnown RBP18.26■□□□□ 0.51
GTF3A-201ENST00000381140 RRP9O43818 475 aaKnown RBP18.26■□□□□ 0.51
GTF3A-201ENST00000381140 TRIM13O60858 407 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 KRT6AP02538 564 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 KRT6BP04259 564 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 KRT6CP48668 564 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 RAB38P57729 211 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 ASPHQ12797 758 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 ABRAXAS2Q15018 415 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 OR4C11Q6IEV9 310 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 AGAP11Q8TF27 550 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 SLC39A7Q92504 469 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 TSLPQ969D9 159 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 GATA5Q9BWX5 397 aaPredicted RBP18.26■□□□□ 0.51
GTF3A-201ENST00000381140 SLC29A3Q9BZD2 475 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 ZNF160Q9HCG1 818 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 FBXW2Q9UKT8 454 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 SLC12A4Q9UP95 1085 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 TIMM22Q9Y584 194 aa18.26■□□□□ 0.51
GTF3A-201ENST00000381140 IGHV3-20A0A0C4DH32 117 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 MKRN2OSH3BPM6 223 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 KLF11O14901 512 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 ESRRBO95718 433 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 ENO1P06733 434 aaKnown RBP18.25■□□□□ 0.51
GTF3A-201ENST00000381140 HIST1H1TP22492 207 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-201ENST00000381140 HTR6P50406 440 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 LIM2P55344 173 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 BTG2P78543 158 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 RHAGQ02094 409 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 GABPB1Q06547 395 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-201ENST00000381140 CUL3Q13618 768 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 NSDHLQ15738 373 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 SCIMPQ6UWF3 145 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 ZCCHC23Q6ZST2 131 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 PARP9Q8IXQ6 854 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 NACC2Q96BF6 587 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 PTCHD1Q96NR3 888 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 ZNF317Q96PQ6 595 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-201ENST00000381140 MAPKAP1Q9BPZ7 522 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 ATP13A2Q9NQ11 1180 aa18.25■□□□□ 0.51
GTF3A-201ENST00000381140 NSG1A0A0A6YYJ2 146 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 WDR91A4D1P6 747 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 EIF4E1BA6NMX2 242 aaKnown RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 PRMT3O60678 531 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 EEDO75530 441 aaKnown RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 MAOAP21397 527 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 ITGA3P26006 1051 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 NAA20P61599 178 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 SLAMF1Q13291 335 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 SOWAHCQ53LP3 525 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 C10orf62Q5T681 223 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 NUDCD3Q8IVD9 361 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 EFCAB3Q8N7B9 438 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 C9orf43Q8TAL5 461 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 LRRC8CQ8TDW0 803 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 SREK1Q8WXA9 508 aaKnown RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 ZNF75CPQ92670 426 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 WBP1Q96G27 269 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 ABHD17AQ96GS6 310 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 CSF3RQ99062 836 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 SLC25A23Q9BV35 468 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 SEMA4CQ9C0C4 833 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 ADNPQ9H2P0 1102 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 ZNF71Q9NQZ8 489 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 C19orf25Q9UFG5 118 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-201ENST00000381140 DAPP1Q9UN19 280 aa18.24■□□□□ 0.51
GTF3A-201ENST00000381140 CROCCQ5TZA2 2017 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 IGHV1-45A0A0A0MS14 117 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 ULK1O75385 1050 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 SEC24DO94855 1032 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-201ENST00000381140 HPP00738 406 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 GBAP04062 536 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 PRB1P04280 392 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 COX6A1P12074 109 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 HNRNPFP52597 415 aaKnown RBP18.23■□□□□ 0.51
GTF3A-201ENST00000381140 FOXA1P55317 472 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 ACTN3Q08043 901 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-201ENST00000381140 SLC13A2Q13183 592 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 CYP20A1Q6UW02 462 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 TMEM205Q6UW68 189 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 NDUFAF7Q7L592 441 aa18.23■□□□□ 0.51
GTF3A-201ENST00000381140 CPEB2Q7Z5Q1 589 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms