RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SLAMF1Q13291 335 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 TMEM205Q6UW68 189 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 SCIMPQ6UWF3 145 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 RAB3IL1Q8TBN0 382 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 TUBB1Q9H4B7 451 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 ZNF395Q9H8N7 513 aaPredicted RBP17.66■□□□□ 0.42
SSU72-203ENST00000378725 POLHQ9Y253 713 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.66■□□□□ 0.42
SSU72-203ENST00000378725 CCL27Q9Y4X3 112 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 HS3ST3B1Q9Y662 390 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 A0A1W2PQ72 361 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 NPIPB8E9PQR5 432 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 PSMD12O00232 456 aaPredicted RBP17.65■□□□□ 0.42
SSU72-203ENST00000378725 SOCS6O14544 535 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 ALOX12BO75342 701 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 LYPLA1O75608 230 aaPredicted RBP17.65■□□□□ 0.42
SSU72-203ENST00000378725 HSPA4LO95757 839 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 SH2D4BQ5SQS7 431 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 KIRREL2Q6UWL6 708 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 QSOX2Q6ZRP7 698 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 PAGE2Q7Z2X7 111 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 MRGPREQ86SM8 312 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 NUDT13Q86X67 352 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 TRIM42Q8IWZ5 723 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 C11orf24Q96F05 449 aaPredicted RBP17.65■□□□□ 0.42
SSU72-203ENST00000378725 SIRT5Q9NXA8 310 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 MS4A12Q9NXJ0 267 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 HAO1Q9UJM8 370 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 ASB4Q9Y574 426 aa17.65■□□□□ 0.42
SSU72-203ENST00000378725 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
SSU72-203ENST00000378725 LOC102723996A0A087X1L8 192 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 OR2W5A6NFC9 320 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 TMEM233B4DJY2 109 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 SLC28A1O00337 649 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 TMPRSS11DO60235 418 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 B4GALT2O60909 372 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 CHEK2O96017 543 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 ITGB2P05107 769 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 KLK1P06870 262 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 FAM58BPP0C7Q3 252 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 TPP2P29144 1249 aaPredicted RBP17.64■□□□□ 0.41
SSU72-203ENST00000378725 PPP2R2AP63151 447 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 HMGCS1Q01581 520 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 BST1Q10588 318 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 DEFB109BQ30KR1 87 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 MINDY4Q4G0A6 757 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 COMMD6Q7Z4G1 85 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 GPR180Q86V85 440 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 ZNF595Q8IYB9 648 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 SORT1Q99523 831 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 RBCK1Q9BYM8 510 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 ILKAPQ9H0C8 392 aaPredicted RBP17.64■□□□□ 0.41
SSU72-203ENST00000378725 MANSC1Q9H8J5 431 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 LYARQ9NX58 379 aaKnown RBP17.64■□□□□ 0.41
SSU72-203ENST00000378725 P4HTMQ9NXG6 502 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 RAP2CQ9Y3L5 183 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 MMACHCQ9Y4U1 282 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 SCN3AQ9NY46 2000 aa17.64■□□□□ 0.41
SSU72-203ENST00000378725 ANKRD11Q6UB99 2663 aaPredicted RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 BLACEA4D250 179 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 PEX12O00623 359 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 CLDN4O14493 209 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 KLF11O14901 512 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 PROM1O43490 865 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 PRMT3O60678 531 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 SNNO75324 88 aaPredicted RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 CDC123O75794 336 aaPredicted RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 RSL1D1O76021 490 aaKnown RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 PRPH2P23942 346 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 HNRNPH2P55795 449 aaKnown RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 HSD17B7P56937 341 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 BTG2P78543 158 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 ATP1A4Q13733 1029 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 TBR1Q16650 682 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 MFSD4BQ5TF39 518 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 CYP20A1Q6UW02 462 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 Q6ZSR9 355 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 SCUBE1Q8IWY4 988 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 C1orf52Q8N6N3 182 aaKnown RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 TMEM52Q8NDY8 209 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 TWIST2Q8WVJ9 160 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 APIPQ96GX9 242 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 METTL2AQ96IZ6 378 aaKnown RBP17.63■□□□□ 0.41
SSU72-203ENST00000378725 CSF3RQ99062 836 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 PRDM9Q9NQV7 894 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 THAP1Q9NVV9 213 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 PHF11Q9UIL8 331 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 FBXW2Q9UKT8 454 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 ATG4BQ9Y4P1 393 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 KCNMB2Q9Y691 235 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 SPACA6W5XKT8 324 aa17.63■□□□□ 0.41
SSU72-203ENST00000378725 IGKV3D-11A0A0A0MRZ8 115 aa17.62■□□□□ 0.41
SSU72-203ENST00000378725 CTNSO60931 367 aa17.62■□□□□ 0.41
SSU72-203ENST00000378725 GBAP04062 536 aa17.62■□□□□ 0.41
SSU72-203ENST00000378725 C8orf89P0DMQ9 161 aa17.62■□□□□ 0.41
SSU72-203ENST00000378725 CPN2P22792 545 aa17.62■□□□□ 0.41
SSU72-203ENST00000378725 HNRNPFP52597 415 aaKnown RBP17.62■□□□□ 0.41
SSU72-203ENST00000378725 RAE1P78406 368 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms