RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ARNTLO00327 626 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 FBP2O00757 339 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 GNB5O14775 395 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MFN2O95140 757 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 NADKO95544 446 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 LUZP2Q86TE4 346 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 CCDC103Q8IW40 242 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MMABQ96EY8 250 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MYADMQ96S97 322 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 HDAC8Q9BY41 377 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 SLAMF8Q9P0V8 285 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 WBP11Q9Y2W2 641 aaKnown RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MYOCOSA0A1B0GUC4 107 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 CDC123O75794 336 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 IL1RNP18510 177 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 TACR1P25103 407 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 PSMB5P28074 263 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 TAP2Q03519 686 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 NDUFAF5Q5TEU4 345 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 ENPP6Q6UWR7 440 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 METTL27Q8N6F8 245 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MAL2Q969L2 176 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MTERF3Q96E29 417 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 DOHHQ9BU89 302 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 POFUT2Q9Y2G5 429 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 N6AMT1Q9Y5N5 214 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 RBBP6Q7Z6E9 1792 aaKnown RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 TFPIP10646 304 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MC1RQ01726 317 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 SMARCD3Q6STE5 483 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 OR2T11Q8NH01 316 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 TIMM29Q9BSF4 260 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 SORBS1Q9BX66 1292 aaKnown RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 PRSS38A1L453 326 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ALOX12P18054 663 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 IL12BP29460 328 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 PSMD7P51665 324 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 FAM214AQ32MH5 1076 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 TGM7Q96PF1 710 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 EHD1Q9H4M9 534 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 GIN1Q9NXP7 522 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ETAA1Q9NY74 926 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 FAM170BA6NMN3 283 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 K7ESM1 405 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SLCO2B1O94956 709 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.199e-8■□□□□ 9.8
TCOF1-202ENST00000377797 OR4N5Q8IXE1 308 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 MAELQ96JY0 434 aaKnown RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SLC6A17Q9H1V8 727 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ANKMY1Q9P2S6 941 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 TAPBPO15533 448 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SDC3O75056 442 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 COQ9O75208 318 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 EIF2DP41214 584 aaKnown RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ITGA1P56199 1179 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 CCSMST1Q4G0I0 132 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 USP53Q70EK8 1073 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 VTCN1Q7Z7D3 282 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 TMEM150AQ86TG1 271 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 C12orf40Q86WS4 652 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 C1GALT1C1Q96EU7 318 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 MACROD1Q9BQ69 325 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 TUBB1Q9H4B7 451 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 Q9N2J8 555 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ADAM30Q9UKF2 790 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 OR51B4Q9Y5P0 310 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 EP400Q96L91 3159 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 GFRA2O00451 464 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ZNF267Q14586 743 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 NADK2Q4G0N4 442 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ARMC4Q5T2S8 1044 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 NUP43Q8NFH3 380 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 DOK4Q8TEW6 326 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 ZDHHC12Q96GR4 267 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-202ENST00000377797 IL1RAPQ9NPH3 570 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SLC35C2Q9NQQ7 365 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 SSR3Q9UNL2 185 aa13.87□□□□□ -0.19
TCOF1-202ENST00000377797 GRXCR2A6NFK2 248 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 AHCYL1O43865 530 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ARRB2P32121 409 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ARHGAP40Q5TG30 622 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 PGM2L1Q6PCE3 622 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 IKBIPQ70UQ0 350 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 STON2Q8WXE9 905 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ZNF419Q96HQ0 510 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 SPATA6Q9NWH7 488 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 CUEDC1Q9NWM3 386 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 SERTAD3Q9UJW9 196 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 GPR37L1O60883 481 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms