RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC6-204ENST00000376643 DNAJB6O75190 326 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 SNRPB2P08579 225 aaKnown RBP13.74□□□□□ -0.21
HDAC6-204ENST00000376643 NCF1P14598 390 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-204ENST00000376643 HNRNPH1P31943 449 aaKnown RBP13.74□□□□□ -0.21
HDAC6-204ENST00000376643 GP5P40197 560 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 PLA2G16P53816 162 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 PLGLB1Q02325 96 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 TBCCQ15814 346 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 XKR6Q5GH73 641 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 NDUFAF5Q5TEU4 345 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 ACAD11Q709F0 780 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 LRRC70Q7Z2Q7 622 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 MAATS1Q7Z4T9 603 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 SLC22A16Q86VW1 577 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 AMER2Q8N7J2 671 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 PDPRQ8NCN5 879 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 PSD4Q8NDX1 1056 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 ANKRD49Q8WVL7 239 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 SDCCAG3Q96C92 435 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 WDR34Q96EX3 536 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 SGCZQ96LD1 299 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 KRT12Q99456 494 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 TBCDQ9BTW9 1192 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 CD274Q9NZQ7 290 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 MYOTQ9UBF9 498 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 A0A1B0GTH9 108 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CCDC189A1A4V9 331 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CCDC166P0CW27 439 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CHRNB4P30926 498 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 PTGER1P34995 402 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 SPRP35270 261 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-204ENST00000376643 GDF5P43026 501 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 PGGT1BP53609 377 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 LIM2P55344 173 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 IRF8Q02556 426 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 RUNX2Q13950 521 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 ZNF460Q14592 562 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 ABHD17CQ6PCB6 329 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 OPN5Q6U736 354 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 RTL4Q6ZR62 310 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 CD163Q86VB7 1156 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 FAM47BQ8NA70 645 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 GOLM1Q8NBJ4 401 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 STAG3L4Q8TBR4 150 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 RND1Q92730 232 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 ART5Q96L15 291 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 PWWP2AQ96N64 755 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 QRFPRQ96P65 431 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 GPR22Q99680 433 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 RBBP8Q99708 897 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■□□□□ 10.6
HDAC6-204ENST00000376643 MS4A12Q9NXJ0 267 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 WHRNQ9P202 907 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 RNF112Q9ULX5 631 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 NCOA6Q14686 2063 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-204ENST00000376643 LRBAP50851 2863 aa13.73□□□□□ -0.21
HDAC6-204ENST00000376643 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 C4orf51C9J302 202 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 FAM47E-STBD1D6RA91 191 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 BCKDKO14874 412 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 HS6ST1O60243 411 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 OR2J2O76002 312 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 TNNI3P19429 210 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 HSPA7P48741 367 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 ST13P50502 369 aaKnown RBP13.72□□□□□ -0.21
HDAC6-204ENST00000376643 GPR143P51810 404 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 RAB10P61026 200 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 PHEXP78562 749 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 HSF1Q00613 529 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 CAV1Q03135 178 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 AP5B1Q2VPB7 878 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 RNFT1Q5M7Z0 435 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 DND1Q8IYX4 353 aaKnown RBP13.72□□□□□ -0.21
HDAC6-204ENST00000376643 FAM173AQ9BQD7 235 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 TMEM79Q9BSE2 394 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 MCMBPQ9BTE3 642 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 ALOXE3Q9BYJ1 711 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 ENKD1Q9H0I2 346 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 NMRAL1Q9HBL8 299 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 NUDT4Q9NZJ9 180 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 PKDREJQ9NTG1 2253 aa13.72□□□□□ -0.21
HDAC6-204ENST00000376643 A0A0G2JN53 185 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CTAGE15A4D2H0 777 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 SYCE1LA8MT33 242 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CYR61O00622 381 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms