RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MEDAGQ5VYS4 303 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 EGFL6Q8IUX8 553 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 THRSPQ92748 146 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 SLC45A3Q96JT2 553 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 DPEP2Q9H4A9 486 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 MYH9P35579 1960 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 ALPIP09923 528 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 TFPTP0C1Z6 253 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 HSD11B1P28845 292 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 VIPR1P32241 457 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 DGKEP52429 567 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 S100A12P80511 92 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 HSDL2Q6YN16 418 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 TPRG1Q6ZUI0 275 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 Q6ZVU0 165 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 TMCO2Q7Z6W1 182 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 SHKBP1Q8TBC3 707 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 BADQ92934 168 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 BIRC8Q96P09 236 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 GNG8Q9UK08 70 aa11.84□□□□□ -0.51
NPLOC4-202ENST00000374747 PRSS51A0A1B0GVH4 220 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 SMCO3A2RU48 225 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TMEM150CB9EJG8 249 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 RASAL1O95294 804 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 VNN2O95498 520 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 HPRP00739 348 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 GGT5P36269 586 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 CHAF1BQ13112 559 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LRRC32Q14392 662 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ABHD13Q7L211 337 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 THOC6Q86W42 341 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TCEANCQ8N8B7 351 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 NUS1Q96E22 293 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 MS4A12Q9NXJ0 267 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 FBP2O00757 339 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 FLRT2O43155 660 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 PROM1O43490 865 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ADAMTS4O75173 837 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 PENKP01210 267 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 FGF3P11487 239 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TCEA1P23193 301 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 MAGEA8P43361 318 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LBX1P52954 281 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNAB2Q13303 367 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LRRC73Q5JTD7 316 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF678Q5SXM1 525 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 PM20D1Q6GTS8 502 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 EPYCQ99645 322 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TBL1XR1Q9BZK7 514 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF831Q5JPB2 1677 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ERI3O43414 337 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 IL7P13232 177 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LY6G5CQ5SRR4 150 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 OR52E4Q8NGH9 312 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 IRF7Q92985 503 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 PAK1IP1Q9NWT1 392 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 HCN3Q9P1Z3 774 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 UTS2RQ9UKP6 389 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 SH2B3Q9UQQ2 575 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ANKRD31Q8N7Z5 1873 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 SMIM30A4D0T7 59 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 CAPN5O15484 640 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 SNAP29O95721 258 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 ANXA3P12429 323 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LAPTM4AQ15012 233 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.525e-8■□□□□ 10.5
NPLOC4-202ENST00000374747 TREML1Q86YW5 311 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 CYB5D2Q8WUJ1 264 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 MAFIPQ8WZ33 124 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 MSANTD3Q96H12 275 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 OR51I1Q9H343 314 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 POLE4Q9NR33 117 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.52
NPLOC4-202ENST00000374747 TEX13DA0A0J9YY54 714 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 SH3PXD2BA1X283 911 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 H0YJX3 145 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC33A1O00400 549 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 PLD2O14939 933 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 AXIN1O15169 862 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 CSTBP04080 98 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 RHOP08100 348 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 HTR1AP08908 422 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 CHRNA6Q15825 494 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 PIGGQ5H8A4 983 aa11.82□□□□□ -0.52
NPLOC4-202ENST00000374747 C6orf141Q5SZD1 244 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms