RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 LIMS1P48059 325 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 HMGA2P52926 109 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 IRF3Q14653 427 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 MED22Q15528 200 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 TAGAPQ8N103 731 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 AQP11Q8NBQ7 271 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 TCEAL4Q96EI5 215 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 MAPKAP1Q9BPZ7 522 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 ROGDIQ9GZN7 287 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 SPNS1Q9H2V7 528 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 TMEM165Q9HC07 324 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 MIEF1Q9NQG6 463 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 RHCGQ9UBD6 479 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 CFAP20Q9Y6A4 193 aaKnown RBP18.29■□□□□ 0.52
TMEM53-202ENST00000372237 ENPP4Q9Y6X5 453 aa18.29■□□□□ 0.52
TMEM53-202ENST00000372237 SYN1P17600 705 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 RHCEP18577 417 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PPM1AP35813 382 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PCBP3P57721 371 aaKnown RBP18.28■□□□□ 0.52
TMEM53-202ENST00000372237 ERAP2Q6P179 960 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PNCKQ6P2M8 343 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 TRAPPC5Q8IUR0 188 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 METTL4Q8N3J2 472 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PARP16Q8N5Y8 322 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 ZNF366Q8N895 744 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 C9orf43Q8TAL5 461 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-202ENST00000372237 SLC5A11Q8WWX8 675 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 SGPP1Q9BX95 441 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 C11orf49Q9H6J7 331 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 TDP1Q9NUW8 608 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 KLK4Q9Y5K2 254 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 FGF18O76093 207 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 DLGAP3O95886 979 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 IFNW1P05000 195 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 IL3P08700 152 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 TPTEP56180 551 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 TAP2Q03519 686 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PRKCDQ05655 676 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 PRSS53Q2L4Q9 553 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 ZNF367Q7RTV3 350 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 TRMT11Q7Z4G4 463 aaKnown RBP18.28■□□□□ 0.52
TMEM53-202ENST00000372237 FAM83FQ8NEG4 500 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-202ENST00000372237 OR9A1PQ8NGU1 263 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 MTERF3Q96E29 417 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 Q96MT0 163 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 SLC6A16Q9GZN6 736 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 SNX8Q9Y5X2 465 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 GPC6Q9Y625 555 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-202ENST00000372237 CCDC88CQ9P219 2028 aa18.28■□□□□ 0.52
TMEM53-202ENST00000372237 EFCAB10A6NFE3 127 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 KLHL18O94889 574 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 MED26O95402 600 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 GASTP01350 101 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 CBLP22681 906 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 GTF2E2P29084 291 aaKnown RBP18.27■□□□□ 0.52
TMEM53-202ENST00000372237 UGT2B15P54855 530 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 TEAD2Q15562 447 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 DUSP7Q16829 419 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 FAM180BQ6P0A1 224 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 KLHL17Q6TDP4 642 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 NXPE4Q6UWF7 544 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 PTCHD4Q6ZW05 846 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 NLGN4XQ8N0W4 816 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 ITM2CQ9NQX7 267 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 DKK3Q9UBP4 350 aa18.27■□□□□ 0.52
TMEM53-202ENST00000372237 SH3D21A4FU49 640 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 ZW10O43264 779 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 MPZL2O60487 215 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 CHMP24386 653 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 POU1F1P28069 291 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 SOX6P35712 828 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 LIMK1P53667 647 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 DSTNP60981 165 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 ZNF658BQ4V348 819 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-202ENST00000372237 UNC5DQ6UXZ4 953 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 GPR65Q8IYL9 337 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 ZNF740Q8NDX6 193 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 OR5M11Q96RB7 305 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 YME1L1Q96TA2 773 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 MGLLQ99685 303 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 CDCA4Q9BXL8 241 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 OR2AG1Q9H205 316 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 EPHX3Q9H6B9 360 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 NMNAT1Q9HAN9 279 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-202ENST00000372237 CCDC177Q9NQR7 707 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-202ENST00000372237 CLN6Q9NWW5 311 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 PEX16Q9Y5Y5 336 aa18.27■□□□□ 0.51
TMEM53-202ENST00000372237 ADH1AP07327 375 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 CRISP1P54107 249 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 PARS2Q7L3T8 475 aaKnown RBP18.26■□□□□ 0.51
TMEM53-202ENST00000372237 HEATR4Q86WZ0 1026 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 SLC44A2Q8IWA5 706 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-202ENST00000372237 NRSN1Q8IZ57 195 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 MMP21Q8N119 569 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 NLNQ9BYT8 704 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 CNOT2Q9NZN8 540 aaKnown RBP18.26■□□□□ 0.51
TMEM53-202ENST00000372237 FTSJ1Q9UET6 329 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 PCDHGA4Q9Y5G9 962 aa18.26■□□□□ 0.51
TMEM53-202ENST00000372237 CARNS1A5YM72 827 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms