RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.68■□□□□ 0.26
CHTOP-203ENST00000368690 IQCF2Q8IXL9 164 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 CLDN19Q8N6F1 224 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 NANOGP1Q8N7R0 232 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 TTC16Q8NEE8 873 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 OR52J3Q8NH60 311 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 SLC12A9Q9BXP2 914 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 EBPLQ9BY08 206 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF717Q9BY31 904 aaPredicted RBP16.68■□□□□ 0.26
CHTOP-203ENST00000368690 SLC6A14Q9UN76 642 aa16.68■□□□□ 0.26
CHTOP-203ENST00000368690 M0R129 80 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 IFNA14P01570 189 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 C8GP07360 202 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PTBP1P26599 531 aaKnown RBP eCLIP16.67■□□□□ 0.269e-7■■□□□ 13.8
CHTOP-203ENST00000368690 AOAHP28039 575 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 AQP1P29972 269 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 CNR2P34972 360 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 MAP2K3P46734 347 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 SLC11A2P49281 568 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TATDN3Q17R31 274 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 SPOUT1Q5T280 376 aaKnown RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 MZT2BQ6NZ67 158 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 KLHL17Q6TDP4 642 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 NPAS3Q8IXF0 933 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 NAGSQ8N159 534 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 MAL2Q969L2 176 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 SH3KBP1Q96B97 665 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 C11orf24Q96F05 449 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TRMT61AQ96FX7 289 aaKnown RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 MYO19Q96H55 970 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 DIRAS2Q96HU8 199 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 BEX2Q9BXY8 128 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PLEKHB1Q9UF11 243 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PIKFYVEQ9Y2I7 2098 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 LINC00854A0A1B0GVQ3 168 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 A0A1W2PQL4 384 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 CBX4O00257 560 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TNFRSF21O75509 655 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 OR2B3O76000 313 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TRBC1P01850 177 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TSPAN19P0C672 248 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 UBL4AP11441 157 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 GPC1P35052 558 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 SLC9A3P48764 834 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TWF1Q12792 350 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF177Q13360 481 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 IKZF1Q13422 519 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 C1DQ13901 141 aaKnown RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 CPTPQ5TA50 214 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PHC2Q8IXK0 858 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 SLC38A6Q8IZM9 456 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 AP3S1Q92572 193 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 COPS8Q99627 209 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 RBFOX1Q9NWB1 397 aaKnown RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 VPS29Q9UBQ0 182 aa16.67■□□□□ 0.26
CHTOP-203ENST00000368690 RPL36Q9Y3U8 105 aaKnown RBP16.67■□□□□ 0.26
CHTOP-203ENST00000368690 PRAMEF25A6NGN4 478 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 HSD3B1P14060 373 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 HSD3B2P26439 372 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 CDONQ4KMG0 1287 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF628Q5EBL2 1059 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 LIPJQ5W064 366 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 METAP1DQ6UB28 335 aaPredicted RBP16.66■□□□□ 0.26
CHTOP-203ENST00000368690 CRIPAKQ8N1N5 446 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 OR4M1Q8NGD0 313 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 AP2M1Q96CW1 435 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 SPATA17Q96L03 361 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 VPS35Q96QK1 796 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 TMEM38AQ9H6F2 299 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 C12orf10Q9HB07 376 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 IL26Q9NPH9 171 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 DNAJC11Q9NVH1 559 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
CHTOP-203ENST00000368690 LHX3Q9UBR4 397 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 PHF11Q9UIL8 331 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 TMPRSS11EQ9UL52 423 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 PRELID1Q9Y255 219 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 PCDHB9Q9Y5E1 797 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 PCDHGB7Q9Y5F8 929 aa16.66■□□□□ 0.26
CHTOP-203ENST00000368690 RNASET2O00584 256 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PCDH17O14917 1159 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PCDH7O60245 1069 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ENTPD6O75354 484 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CDRT1O95170 752 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GADD45GO95257 159 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CD160O95971 181 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 RHCEP18577 417 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 RPS24P62847 133 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ARF5P84085 180 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GAB1Q13480 694 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ZXDCQ2QGD7 858 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PYDC2Q56P42 97 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CRB2Q5IJ48 1285 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GCNT6Q5T4J0 391 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms