RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C9orf106Q8NAJ2 232 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 LPGAT1Q92604 370 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 PEX13Q92968 403 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 TIMP4Q99727 224 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 SH2D2AQ9NP31 389 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 ZFP64Q9NPA5 681 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF701Q9NV72 531 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-202ENST00000367740 QPCTLQ9NXS2 382 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 NDRG3Q9UGV2 375 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 ROS1P08922 2347 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 KCNAB3O43448 404 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 GAS8O95995 478 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 TMIGD3P0DMS9 266 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-202ENST00000367740 CDH1P12830 882 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 PWP1Q13610 501 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 HSDL2Q6YN16 418 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 C17orf64Q86WR6 236 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 PM20D2Q8IYS1 436 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 CA13Q8N1Q1 262 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
VAMP4-202ENST00000367740 ASB11Q8WXH4 323 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 IQCDQ96DY2 449 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 SLC30A3Q99726 388 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 BPIFA3Q9BQP9 254 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 ADAP2Q9NPF8 381 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 BOKQ9UMX3 212 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-202ENST00000367740 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
VAMP4-202ENST00000367740 MED12LQ86YW9 2145 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 C4orf51C9J302 202 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 AKR1B10O60218 316 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 AVILO75366 819 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 CHRM3P20309 590 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 GRK3P35626 688 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 RAB8AP61006 207 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 COPS2P61201 443 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 KCNJ2P63252 427 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 WIPI1Q5MNZ9 446 aaPredicted RBP13.43□□□□□ -0.26
VAMP4-202ENST00000367740 PRAMEF20Q5VT98 475 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 OPN5Q6U736 354 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF321PQ8N8H1 164 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 NT5CQ8TCD5 201 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 OSBPL8Q9BZF1 889 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 AMBRA1Q9C0C7 1298 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
VAMP4-202ENST00000367740 PROK2Q9HC23 129 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 CHRAC1Q9NRG0 131 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 CAMK2AQ9UQM7 478 aa13.43□□□□□ -0.26
VAMP4-202ENST00000367740 H3BMM5 538 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 GFYI3L273 518 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF189O75820 626 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 SERPIND1P05546 499 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 CRYGSP22914 178 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 LOXP28300 417 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PTPN7P35236 360 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 MC3RP41968 323 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 HNRNPFP52597 415 aaKnown RBP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 ATP5J2P56134 94 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 CUL1Q13616 776 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 VEZF1Q14119 521 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PPP1R21Q6ZMI0 780 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PRELID2Q8N945 189 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 TMEM52Q8NDY8 209 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 GIMAP7Q8NHV1 300 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 MARK4Q96L34 752 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 WFIKKN1Q96NZ8 548 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 SFXN3Q9BWM7 321 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 TREX1Q9NSU2 369 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 LMBRD1Q9NUN5 540 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 KLHL28Q9NXS3 571 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
VAMP4-202ENST00000367740 WIF1Q9Y5W5 379 aa13.42□□□□□ -0.26
VAMP4-202ENST00000367740 CTAGE15A4D2H0 777 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 ERI2A8K979 691 aaKnown RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 A8MV72 311 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 OR1F1O43749 312 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 ESR1P03372 595 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 GDF1P27539 372 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 ARNTP27540 789 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 CLCN7P51798 805 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 HADHBP55084 474 aaKnown RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 RNF4P78317 190 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 RGS1Q08116 209 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 BMPR2Q13873 1038 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 SF3B4Q15427 424 aaKnown RBP eCLIP13.41□□□□□ -0.263e-6■■■□□ 15.4
VAMP4-202ENST00000367740 ELAVL1Q15717 326 aaKnown RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 CLEC12BQ2HXU8 276 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 DCST1Q5T197 706 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 SLC22A10Q63ZE4 541 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 VASNQ6EMK4 673 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms