RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 GPX3P22352 226 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 GLRA1P23415 457 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CTNNA2P26232 953 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 HSPA1LP34931 641 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 ASMTP46597 345 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 BACE1P56817 501 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 MEF2DQ14814 521 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 WSCD2Q2TBF2 565 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 FASTKD1Q53R41 847 aaKnown RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 ATP1A1-AS1Q5TC04 95 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 SNRNP48Q6IEG0 339 aaKnown RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 CAPN13Q6MZZ7 669 aaPredicted RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 ADCK1Q86TW2 530 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CACUL1Q86Y37 369 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CNPY4Q8N129 248 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 RNF148Q8N7C7 305 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 OR10V1Q8NGI7 309 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 OR10G8Q8NGN5 311 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 P3H4Q92791 437 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CXorf58Q96LI9 332 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 GANQ9H2C0 597 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CXXC4Q9H2H0 198 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 PLEK2Q9NYT0 353 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 ZNF319Q9P2F9 582 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 DBF4Q9UBU7 674 aaPredicted RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 CLIP2Q9UDT6 1046 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 SH3BGRL2Q9UJC5 107 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 MRPS2Q9Y399 296 aaKnown RBP4.28□□□□□ -1.72
RPL39-201ENST00000361575 ANGPTL3Q9Y5C1 460 aa4.28□□□□□ -1.72
RPL39-201ENST00000361575 UMODL1Q5DID0 1318 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 RAD54L2Q9Y4B4 1467 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 F8WDY8 70 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SIGLEC5O15389 551 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 B4GAT1O43505 415 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 LANCL1O43813 399 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 LMX1BO60663 402 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 DIRAS3O95661 229 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 EML2O95834 649 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 IGHDP01880 384 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 HEXBP07686 556 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SFTPBP07988 381 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 PATE4P0C8F1 98 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SELEP16581 610 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 AADACP22760 399 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 CCND2P30279 289 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 CCKARP32238 428 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 MAP2K2P36507 400 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ACAA2P42765 397 aaKnown RBP4.27□□□□□ -1.73
RPL39-201ENST00000361575 IRX4P78413 519 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 KCNJ10P78508 379 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SGCGQ13326 291 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 DPYSQ14117 519 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 EFTUD2Q15029 972 aaKnown RBP eCLIP4.27□□□□□ -1.73
RPL39-201ENST00000361575 OR1C1Q15619 314 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 C3AR1Q16581 482 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ZNF528Q3MIS6 628 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 FGD3Q5JSP0 725 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 LDLRAP1Q5SW96 308 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 RAET1GQ6H3X3 334 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 IRGCQ6NXR0 463 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
RPL39-201ENST00000361575 TMEM26Q6ZUK4 368 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 BNIPLQ7Z465 357 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SLC22A16Q86VW1 577 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 AMZ2Q86W34 360 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ARL6IP6Q8N6S5 226 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 CCDC185Q8N715 623 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 TMEM178AQ8NBL3 297 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SUSD6Q92537 303 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ZNF486Q96H40 463 aaPredicted RBP4.27□□□□□ -1.73
RPL39-201ENST00000361575 RAB17Q9H0T7 212 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ECT2Q9H8V3 914 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ENTPD4Q9Y227 616 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ATG4BQ9Y4P1 393 aa4.27□□□□□ -1.73
RPL39-201ENST00000361575 ZMYM6O95789 1325 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 SHISA7A6NL88 538 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 PMS2P5A8MQ11 134 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 TLX2O43763 284 aaPredicted RBP4.26□□□□□ -1.73
RPL39-201ENST00000361575 OR6A2O95222 327 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 SERPINF2P08697 491 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 TPBGLP0DKB5 382 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 ARF4P18085 180 aaPredicted RBP4.26□□□□□ -1.73
RPL39-201ENST00000361575 KIF5BP33176 963 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
RPL39-201ENST00000361575 TKTL1P51854 596 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 LIMK2P53671 638 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 GEMP55040 296 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 SLC26A5P58743 744 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 GUCY2DQ02846 1103 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 POU3F1Q03052 451 aaPredicted RBP4.26□□□□□ -1.73
RPL39-201ENST00000361575 MTF1Q14872 753 aa4.26□□□□□ -1.73
RPL39-201ENST00000361575 EXOSC7Q15024 291 aaKnown RBP4.26□□□□□ -1.73
RPL39-201ENST00000361575 TAB1Q15750 504 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms