RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 CA13Q8N1Q1 262 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 CPSF7Q8N684 471 aaKnown RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 EFCAB3Q8N7B9 438 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.05■□□□□ 0.16
LMNA-202ENST00000361308 GFM2Q969S9 779 aaKnown RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 GBP5Q96PP8 586 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 YIPF2Q9BWQ6 316 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 FAIM2Q9BWQ8 316 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 DPY30Q9C005 99 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 KCMF1Q9P0J7 381 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 HCN3Q9P1Z3 774 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 ATG4BQ9Y4P1 393 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 TMEM184BQ9Y519 407 aaPredicted RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 C9orf172C9J069 976 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 MEN1O00255 615 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 FCHO1O14526 889 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 PROM1O43490 865 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 SLC22A3O75751 556 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 LRATO95237 230 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 IL3P08700 152 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 PRPS1L1P21108 318 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 AGXTP21549 392 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 CPN2P22792 545 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 TLX1P31314 330 aaPredicted RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 BUD31P41223 144 aaPredicted RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 HNRNPH2P55795 449 aaKnown RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 UFM1P61960 85 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 GABREP78334 506 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 DCDP81605 110 aaKnown RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 DSG2Q14126 1118 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 UBAP2LQ14157 1087 aaKnown RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 NDUFAF5Q5TEU4 345 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 PAOXQ6QHF9 649 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 IKBIPQ70UQ0 350 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 CLNKQ7Z7G1 428 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 DSELQ8IZU8 1212 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 OR51Q1Q8NH59 317 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 LRFN5Q96NI6 719 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 TEX10Q9NXF1 929 aaPredicted RBP16.05■□□□□ 0.16
LMNA-202ENST00000361308 MAP4K5Q9Y4K4 846 aa16.05■□□□□ 0.16
LMNA-202ENST00000361308 A0A1W2PR48 441 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 PSMD12O00232 456 aaPredicted RBP16.04■□□□□ 0.16
LMNA-202ENST00000361308 ANKRD28O15084 1053 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 AKAP10O43572 662 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 STK17BO94768 372 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 PIM1P11309 404 aaPredicted RBP16.04■□□□□ 0.16
LMNA-202ENST00000361308 FBLP22087 321 aaKnown RBP16.04■□□□□ 0.16
LMNA-202ENST00000361308 RBMS1P29558 406 aaKnown RBP16.04■□□□□ 0.16
LMNA-202ENST00000361308 RORAP35398 523 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 TERF2Q15554 542 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 SYT16Q17RD7 645 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 ARHGAP40Q5TG30 622 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 FAM71E1Q6IPT2 247 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 SLC46A1Q96NT5 459 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 B3GNT4Q9C0J1 378 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 ACTL8Q9H568 366 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 ZNF385DQ9H6B1 395 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 WDR41Q9HAD4 459 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 ZIM2Q9NZV7 527 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 ARMCX1Q9P291 453 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 TRPC4Q9UBN4 977 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 MAPRE3Q9UPY8 281 aa16.04■□□□□ 0.16
LMNA-202ENST00000361308 PRMT3O60678 531 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 RNH1P13489 461 aaKnown RBP16.03■□□□□ 0.16
LMNA-202ENST00000361308 DRD2P14416 443 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 GPX3P22352 226 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 ADSLP30566 484 aaPredicted RBP16.03■□□□□ 0.16
LMNA-202ENST00000361308 ALDH9A1P49189 494 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 MRPL19P49406 292 aaKnown RBP16.03■□□□□ 0.16
LMNA-202ENST00000361308 RAB38P57729 211 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 SHC2P98077 582 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 MC1RQ01726 317 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 KLC1Q07866 573 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 NKAIN1Q4KMZ8 207 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 KRTCAP2Q8N6L1 136 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 PEX11GQ96HA9 241 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 ZBTB18Q99592 522 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 DPH2Q9BQC3 489 aaPredicted RBP16.03■□□□□ 0.16
LMNA-202ENST00000361308 MYLK2Q9H1R3 596 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 REEP4Q9H6H4 257 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 MIEF1Q9NQG6 463 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 CCDC167Q9P0B6 97 aa16.03■□□□□ 0.16
LMNA-202ENST00000361308 C1orf226A1L170 272 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.16
LMNA-202ENST00000361308 ITGAXP20702 1163 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 DDCP20711 480 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 JAK1P23458 1154 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 RPL3P39023 403 aaKnown RBP16.02■□□□□ 0.16
LMNA-202ENST00000361308 XCR1P46094 333 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 TNFRSF17Q02223 184 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 FOXC1Q12948 553 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 ZNF385CQ66K41 422 aaPredicted RBP16.02■□□□□ 0.16
LMNA-202ENST00000361308 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.16
LMNA-202ENST00000361308 OR9I1Q8NGQ6 314 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
LMNA-202ENST00000361308 STARD8Q92502 1023 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms