RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 VILLO15195 856 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 STBD1O95210 358 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 LCKP06239 509 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ZUFSPQ96AP4 578 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 XPNPEP1Q9NQW7 623 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 HCN4Q9Y3Q4 1203 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 RNF215Q9Y6U7 377 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PTPRUQ92729 1446 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 GOSR2O14653 212 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SOX14O95416 240 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PENKP01210 267 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ADCYAP1R1P41586 468 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PER3P56645 1201 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 METTL11BQ5VVY1 283 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ANKRD22Q5VYY1 191 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ILDR1Q86SU0 546 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ZDHHC1Q8WTX9 485 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ABRACLQ9P1F3 81 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CPQQ9Y646 472 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BCAS2O75934 225 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ADH7P40394 386 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BDH1Q02338 343 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 NPIPA2E9PIF3 369 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 NPIPA3F8WFD2 350 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SOX30O94993 753 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 AOC1P19801 751 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TACR2P21452 398 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 L1CAMP32004 1257 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PTCHD3Q3KNS1 767 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TLDC1Q6P9B6 456 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR6N1Q8NGY5 312 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SLC35F5Q8WV83 523 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ABCG5Q9H222 651 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 KLHL9Q9P2J3 617 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 HES2Q9Y543 173 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TEX51A0A1B0GUA7 166 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 OR6C74A6NCV1 312 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MC2RQ01718 297 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 GPR33Q49SQ1 333 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 HERVK_113Q902F9 699 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ZBED3Q96IU2 234 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 DUS2Q9NX74 493 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 C2orf72A6NCS6 295 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 UCHL1P09936 223 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 XRCC1P18887 633 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MALLQ13021 153 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF630Q2M218 657 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SMIM15Q7Z3B0 74 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PARP4Q9UKK3 1724 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ITPK1Q13572 414 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 NUS1Q96E22 293 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 GJD4Q96KN9 370 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MRI1Q9BV20 369 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 CPNE5Q9HCH3 593 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 A0A0U1RQJ8 604 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 EFCAB7A8K855 629 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ETFAP13804 333 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 EFNA1P20827 205 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SNTB2Q13425 540 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MEP1AQ16819 746 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ANKRD54Q6NXT1 300 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 RSC1A1Q92681 617 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 GRXCR2A6NFK2 248 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 GNPDA2Q8TDQ7 276 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 CNOT9Q92600 299 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 GLYATL1Q969I3 302 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ARL5BQ96KC2 179 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ST14Q9Y5Y6 855 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 D6RAR5 112 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 S100A7P31151 101 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 HOXA9P31269 272 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM156Q8N614 296 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 NLGN2Q8NFZ4 835 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 NTAN1Q96AB6 310 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 UBR1Q8IWV7 1749 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ATP6V1G2-DDX39BF2Z307 99 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PTPRRQ15256 657 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 C1orf94Q6P1W5 598 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SAMD11Q96NU1 681 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 G6PC3Q9BUM1 346 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 MRM3Q9HC36 420 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ASB4Q9Y574 426 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PCDHGA2Q9Y5H1 932 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ACTL6BO94805 426 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PRKACBP22694 351 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 RSU1Q15404 277 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ZC3H14Q6PJT7 736 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TMPPEQ6ZT21 453 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 FBXL20Q96IG2 436 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SPIN2AQ99865 258 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SPIN2BQ9BPZ2 258 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 POLDIP3Q9BY77 421 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms