RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 C1orf61Q13536 156 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 CARTPTQ16568 116 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 C14orf80Q86SX3 495 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 POC5Q8NA72 575 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 FAM159BA6NKW6 160 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 EFCAB9A8MZ26 197 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 MANBAO00462 879 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 GXYLT1Q4G148 440 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 NCEH1Q6PIU2 408 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 CLNKQ7Z7G1 428 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 ZNF227Q86WZ6 799 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PKP4Q99569 1192 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 DPH7Q9BTV6 452 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 SIX2Q9NPC8 291 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PAK6Q9NQU5 681 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 TNFRSF10DQ9UBN6 386 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 LOC102723532A0A0G2JNH3 316 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 A0A0J9YY10 115 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 TP73O15350 636 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PORP16435 677 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 CDC6Q99741 560 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 APOOQ9BUR5 198 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 AKTIPQ9H8T0 292 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 TRIM36Q9NQ86 728 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 RIMKLBQ9ULI2 386 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 A0A1W2PPL8 197 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 FOXE1O00358 373 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 GFRA2O00451 464 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 TFECO14948 347 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 SLC7A9P82251 487 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 EFR3AQ14156 821 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 LPAL2Q16609 132 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 C15orf39Q6ZRI6 1047 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 SCRN2Q96FV2 425 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 CASD1Q96PB1 797 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 RPF2Q9H7B2 306 aaKnown RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 SLC39A1Q9NY26 324 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 PLD2O14939 933 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PTGIRP43119 386 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 PTDSS1P48651 473 aaKnown RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 FADDQ13158 208 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 MFSD13AQ14CX5 517 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 SYCE2Q6PIF2 218 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 DEFB123Q8N688 67 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 DIO2Q92813 273 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 FER1L6-AS2Q96M78 137 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 CCNL2Q96S94 520 aaPredicted RBP10.84□□□□□ -0.67
FN1-204ENST00000356005 FN3KQ9H479 309 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 ZNF639Q9UID6 485 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 FKBP7Q9Y680 259 aa10.84□□□□□ -0.67
FN1-204ENST00000356005 ZNF35P13682 527 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 PGAM2P15259 253 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 DEFB103AP81534 67 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 TTLL10Q6ZVT0 673 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 GNPDA2Q8TDQ7 276 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 XYLT2Q9H1B5 865 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 COL22A1Q8NFW1 1626 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 IGKV6-21A0A0C4DH24 114 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 TULP2O00295 520 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SDC3O75056 442 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 CDC123O75794 336 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 AHSGP02765 367 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 ARPC4P59998 168 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 FIGLAQ6QHK4 219 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 BBS10Q8TAM1 723 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 FRS2Q8WU20 508 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SH3YL1Q96HL8 342 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 KCTD18Q6PI47 426 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 TMIEQ8NEW7 156 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SEC14L1Q92503 715 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 HSPA12BQ96MM6 686 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SEC14L4Q9UDX3 406 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 MCTS1Q9ULC4 181 aaKnown RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 MTPNP58546 118 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 HMGCS1Q01581 520 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 ZNF33BQ06732 778 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 ATP1A4Q13733 1029 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 MLC1Q15049 377 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 CCDC116Q8IYX3 515 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 FZD3Q9NPG1 666 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 PVALBP20472 110 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 EFNA1P20827 205 aaPredicted RBP10.83□□□□□ -0.68
FN1-204ENST00000356005 GKP32189 559 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 KCNC4Q03721 635 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 ZNF234Q14588 700 aa10.83□□□□□ -0.68
FN1-204ENST00000356005 SLC14A2Q15849 920 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms