RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PNCKQ6P2M8 343 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 KIAA1958Q8N8K9 716 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 ANKRD53Q8N9V6 530 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 OR9Q2Q8NGE9 314 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 COPS4Q9BT78 406 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 ZNF717Q9BY31 904 aaPredicted RBP20.78■□□□□ 0.92
SHMT1-202ENST00000352886 NLNQ9BYT8 704 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 TBCCD1Q9NVR7 557 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 ICKQ9UPZ9 632 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 IDUAP35475 653 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 IDH2P48735 452 aaKnown RBP20.78■□□□□ 0.92
SHMT1-202ENST00000352886 PXNP49023 591 aaPredicted RBP20.78■□□□□ 0.92
SHMT1-202ENST00000352886 MAPK12P53778 367 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 ADAMTSL4Q6UY14 1074 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 LRRTM4Q86VH4 590 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 ADGRF3Q8IZF5 1079 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 OR5K2Q8NHB8 316 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 F2RL3Q96RI0 385 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 PCDHGA2Q9Y5H1 932 aa20.78■□□□□ 0.92
SHMT1-202ENST00000352886 OR2A25A4D2G3 310 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 C5orf67F2Z3F1 127 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 POU2F2P09086 479 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 DDCP20711 480 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 PSMB5P28074 263 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 XCR1P46094 333 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 NCS1P62166 190 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 CDK3Q00526 305 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 DEPDC1Q5TB30 811 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ADGRD2Q7Z7M1 963 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 DSG4Q86SJ6 1040 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 IGFN1Q86VF2 1251 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ARMC8Q8IUR7 673 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 CCDC103Q8IW40 242 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 TMCO5AQ8N6Q1 288 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ABCG4Q9H172 646 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 EPS8L2Q9H6S3 715 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 AMBNQ9NP70 447 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 SLAMF7Q9NQ25 335 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 PRSS16Q9NQE7 514 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 PRKAG2Q9UGJ0 569 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 FEZF1A0PJY2 475 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 CLDN25C9JDP6 229 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ERGP11308 486 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 FUT4P22083 530 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ALDH9A1P49189 494 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 RPS26P62854 115 aaKnown RBP20.77■□□□□ 0.92
SHMT1-202ENST00000352886 FOXD4Q12950 439 aaPredicted RBP20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ATP1A4Q13733 1029 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 GANABQ14697 944 aaKnown RBP20.77■□□□□ 0.92
SHMT1-202ENST00000352886 CEACAM20Q6UY09 585 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 DCDC5Q6ZRR9 648 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 SMARCD2Q92925 531 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 COX4I2Q96KJ9 171 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 PIP5K1AQ99755 562 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 AIF1LQ9BQI0 150 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 HDAC8Q9BY41 377 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 RHBGQ9H310 441 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 ACER3Q9NUN7 267 aa20.77■□□□□ 0.92
SHMT1-202ENST00000352886 HEATR5BQ9P2D3 2071 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 TRBC2A0A5B9 178 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 IGLON5A6NGN9 336 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PCDH17O14917 1159 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 POU2F1P14859 743 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 C21orf33P30042 268 aaPredicted RBP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 ITGADQ13349 1161 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PIP5KL1Q5T9C9 394 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PROX1Q92786 737 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 MS4A8Q9BY19 250 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 SELENONQ9NZV5 590 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PSORS1C1Q9UIG5 152 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 FAM32AQ9Y421 112 aaKnown RBP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 CD36P16671 472 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 UBE2UQ5VVX9 321 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 METRNLQ641Q3 311 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 BTLAQ7Z6A9 289 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 CENPSQ8N2Z9 138 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 RHOXF1Q8NHV9 184 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 UTP15Q8TED0 518 aaKnown RBP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 RPL3LQ92901 407 aaKnown RBP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 FGF13Q92913 245 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 RAB7BQ96AH8 199 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 TM4SF18Q96CE8 201 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 ZNF556Q9HAH1 456 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 PELI2Q9HAT8 420 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHMT1-202ENST00000352886 ERGIC3Q9Y282 383 aa20.76■□□□□ 0.91
SHMT1-202ENST00000352886 H7BY64 318 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 SEMA3DO95025 777 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 NADKO95544 446 aaPredicted RBP20.75■□□□□ 0.91
SHMT1-202ENST00000352886 BSGP35613 385 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 TGFBR2P37173 567 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 PSMD7P51665 324 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 MANFP55145 182 aaKnown RBP20.75■□□□□ 0.91
SHMT1-202ENST00000352886 ZNF846Q147U1 533 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 ARHGAP19Q14CB8 494 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 DUSP7Q16829 419 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 DGUOKQ16854 277 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 ARMC5Q96C12 935 aa20.75■□□□□ 0.91
SHMT1-202ENST00000352886 PRAP1Q96NZ9 151 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms