RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 CDK3Q00526 305 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FOXM1Q08050 763 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DNASE1L3Q13609 305 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 RGNQ15493 299 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TAB1Q15750 504 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZNF385BQ569K4 471 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DCST1Q5T197 706 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 KIAA1211LQ6NV74 962 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 C6orf120Q7Z4R8 191 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.05□□□□□ -0.963e-10■■■■■ 53.3
CSNK2A1-202ENST00000349736 HM13Q8TCT9 377 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SLC17A9Q9BYT1 436 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CPEB1Q9BZB8 566 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 NUAK2Q9H093 628 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 UNC13CQ8NB66 2214 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 HPGDP15428 266 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CDH3P22223 829 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CERS1P27544 350 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DNAJA1P31689 397 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 RGS8P57771 180 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CDC42P60953 191 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZNF77Q15935 545 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SPIN4Q56A73 249 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PRRT3Q5FWE3 981 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CCNJQ5T5M9 372 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 KIAA1161Q6NSJ0 714 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZNF730Q6ZMV8 503 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DCP2Q8IU60 420 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TCEANCQ8N8B7 351 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 GRHL3Q8TE85 626 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FAIM2Q9BWQ8 316 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PTTG2Q9NZH5 202 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZNF282Q9UDV7 671 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 MRPS7Q9Y2R9 242 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 WDR90Q96KV7 1748 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ANHXE9PGG2 379 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FGF19O95750 216 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 LATS1O95835 1130 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 MATN1P21941 496 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TFF2Q03403 129 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ERV3-1Q14264 604 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SYPL1Q16563 259 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZXDCQ2QGD7 858 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZBED5Q49AG3 693 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SOWAHCQ53LP3 525 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 HACD2Q6Y1H2 254 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 WFIKKN2Q8TEU8 576 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PMEPA1Q969W9 287 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 C1GALT1C1Q96EU7 318 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SLC35G5Q96KT7 338 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ALPK1Q96QP1 1244 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 INSM2Q96T92 566 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FAM129BQ96TA1 746 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CEP44Q9C0F1 390 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 POLR2J3Q9H1A7 115 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 OR51V1Q9H2C8 321 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 DCAF13Q9NV06 445 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 RLIMQ9NVW2 624 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TTC28Q96AY4 2481 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 OR6C74A6NCV1 312 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PENKP01210 267 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 CDK9P50750 372 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ILF3Q12906 894 aaKnown RBP eCLIP9.05□□□□□ -0.966e-7■■■□□ 18.4
CSNK2A1-202ENST00000349736 IRF4Q15306 451 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 SLC36A3Q495N2 470 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 HENMT1Q5T8I9 393 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FAM92BQ6ZTR7 304 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 NUDT13Q86X67 352 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 MCFD2Q8NI22 146 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 GPR151Q8TDV0 419 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 RERGQ96A58 199 aaPredicted RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PDLIM5Q96HC4 596 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TMEM19Q96HH6 336 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 ZDHHC7Q9NXF8 308 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 VNN3Q9NY84 501 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 PSME2Q9UL46 239 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 WDR37Q9Y2I8 494 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 OR10H1Q9Y4A9 318 aa9.05□□□□□ -0.96
CSNK2A1-202ENST00000349736 TPRP12270 2363 aaKnown RBP9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 TCRBV21S2A2A0A5A6 115 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 TBX1O43435 398 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 CCNB2O95067 398 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 ILF2Q12905 390 aaKnown RBP9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 NDUFAF5Q5TEU4 345 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 USP53Q70EK8 1073 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 GALNT7Q86SF2 657 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 AMER3Q8N944 861 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 GPR174Q9BXC1 333 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 C1QTNF7Q9BXJ2 289 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 FAM120CQ9NX05 1096 aaKnown RBP9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 KLHL28Q9NXS3 571 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 PCDHGB3Q9Y5G1 929 aa9.04□□□□□ -0.96
CSNK2A1-202ENST00000349736 PCYT1BQ9Y5K3 369 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms