RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 AIFM2Q9BRQ8 373 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 GALNT9Q9HCQ5 603 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 CNOT2Q9NZN8 540 aaKnown RBP17.86■□□□□ 0.45
SCARF1-202ENST00000348987 SEC14L4Q9UDX3 406 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 PLEKHB1Q9UF11 243 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-202ENST00000348987 SRRDQ9UH36 339 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 TRPS1Q9UHF7 1281 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 STUB1Q9UNE7 303 aa17.86■□□□□ 0.45
SCARF1-202ENST00000348987 BTN3A3O00478 584 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MYL12BO14950 172 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 ADAMDEC1O15204 470 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 FZD6O60353 706 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TRIM3O75382 744 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SLC22A5O76082 557 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SRCP12931 536 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 EPB42P16452 691 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MYL12AP19105 171 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TNNI3P19429 210 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 HMGCLP35914 325 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SOX9P48436 509 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 RAB25P57735 213 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 RHOAP61586 193 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 RRAS2P62070 204 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 CACNG1Q06432 222 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 ZNF267Q14586 743 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SPHARQ15513 63 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MICAQ29983 383 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 CYP27C1Q4G0S4 372 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 CCNJQ5T5M9 372 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 LIPKQ5VXJ0 399 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 APIPQ96GX9 242 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MSANTD3Q96H12 275 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 APOLD1Q96LR9 279 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 QRFPRQ96P65 431 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 IL4I1Q96RQ9 567 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SLC22A12Q96S37 553 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 DOHHQ9BU89 302 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 NTMT1Q9BV86 223 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MALT1Q9UDY8 824 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 HYKKA2RU49 373 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SMAD6O43541 496 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TPPPO94811 219 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SLC25A14O95258 325 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 PRPS2P11908 318 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SUZ12Q15022 739 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 WSCD2Q2TBF2 565 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 GDPGP1Q6ZNW5 385 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TMCO2Q7Z6W1 182 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TIGD4Q8IY51 512 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SYNPOQ8N3V7 929 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 C19orf18Q8NEA5 215 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 DNAJA4Q8WW22 397 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 TMEM203Q969S6 136 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SH3KBP1Q96B97 665 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 EBPLQ9BY08 206 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 CLN6Q9NWW5 311 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 SSR3Q9UNL2 185 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 LSM2Q9Y333 95 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 PRRC2BQ5JSZ5 2229 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 FAM240BA0A1B0GVZ2 78 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 ARHGEF15O94989 841 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 INHAP05111 366 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MSL3P1P0C860 447 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 POU1F1P28069 291 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MRPL28Q13084 256 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 ANKS3Q6ZW76 656 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 FAM126AQ9BYI3 521 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 MCOLN1Q9GZU1 580 aa17.85■□□□□ 0.45
SCARF1-202ENST00000348987 PPIL3Q9H2H8 161 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 RBFOX1Q9NWB1 397 aaKnown RBP17.85■□□□□ 0.45
SCARF1-202ENST00000348987 LINC00862A6NCI5 91 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 J3KTA2 159 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 TBL1XO60907 577 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 SLC2A2P11168 524 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-202ENST00000348987 HLA-EP13747 358 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 ARSBP15848 533 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 CNR2P34972 360 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 RHAGQ02094 409 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 SNTA1Q13424 505 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 VEZF1Q14119 521 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 FLYWCH1Q4VC44 716 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 ADGRG2Q8IZP9 1017 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 OR4C15Q8NGM1 316 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 MSLNLQ96KJ4 702 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 POLR2J2Q9GZM3 115 aaKnown RBP17.84■□□□□ 0.45
SCARF1-202ENST00000348987 ASB8Q9H765 288 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 TPT1P8Q9HAU6 139 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 IL26Q9NPH9 171 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 FZD4Q9ULV1 537 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 OARD1Q9Y530 152 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 SH3D21A4FU49 640 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 ENTPD6O75354 484 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 HBQ1P09105 142 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 ITGB7P26010 798 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 CCL23P55773 120 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 PER3P56645 1201 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 PCDH1Q08174 1060 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 MFSD13AQ14CX5 517 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 DGKKQ5KSL6 1271 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 DDI2Q5TDH0 399 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms