RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ROGDIQ9GZN7 287 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 ATP13A2Q9NQ11 1180 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 LATS2Q9NRM7 1088 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 B3GNT2Q9NY97 397 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 MRPL39Q9NYK5 338 aaKnown RBP15.21■□□□□ 0.02
HMGA1-202ENST00000347617 IL17CQ9P0M4 197 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 SH3BP4Q9P0V3 963 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 SSR3Q9UNL2 185 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 HYKKA2RU49 373 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 SLC9A3R1O14745 358 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 FZD6O60353 706 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 EPCAMP16422 314 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 GJA1P17302 382 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 AMD1P17707 334 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 NUDT6P53370 316 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 RHOAP61586 193 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 GPM6BQ13491 265 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 TEAD2Q15562 447 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 SSX1Q16384 188 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 PDZK1Q5T2W1 519 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 LCN1P1Q5VSP4 162 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ANXA8L1Q5VT79 327 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 MZT2BQ6NZ67 158 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ZNF621Q6ZSS3 439 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 CADM2Q8N3J6 435 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 VPS37AQ8NEZ2 397 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 WDR36Q8NI36 951 aaKnown RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ENKURQ8TC29 256 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 UTP15Q8TED0 518 aaKnown RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 OPALINQ96PE5 141 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 CNPPD1Q9BV87 410 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 CHST8Q9H2A9 424 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 TRIM39Q9HCM9 518 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 AMBNQ9NP70 447 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 TOR4AQ9NXH8 423 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ING3Q9NXR8 418 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 NUFIP1Q9UHK0 495 aaKnown RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 ACTL7AQ9Y615 435 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 CFAP20Q9Y6A4 193 aaKnown RBP15.2■□□□□ 0.02
HMGA1-202ENST00000347617 BPTFQ12830 3046 aa15.2■□□□□ 0.02
HMGA1-202ENST00000347617 KCNE1BA0A087WTH5 132 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 OR6C70A6NIJ9 312 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 A8MV72 311 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NRG2O14511 850 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 SCN2BO60939 215 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 RPS19P39019 145 aaKnown RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 RBBP4Q09028 425 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 LMAN2Q12907 356 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NCF4Q15080 339 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 BAK1Q16611 211 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NOXRED1Q6NXP6 359 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 FAM131AQ6UXB0 335 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 RAVER1Q8IY67 606 aaKnown RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 ANKK1Q8NFD2 765 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 WFDC5Q8TCV5 224 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 AP3S1Q92572 193 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 REPS1Q96D71 796 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 TCEAL4Q96EI5 215 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 MYO19Q96H55 970 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 OR5M11Q96RB7 305 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 MND1Q9BWT6 205 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 APOL5Q9BWW9 433 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 TPT1P8Q9HAU6 139 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NDUFAF4Q9P032 175 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 MARK1Q9P0L2 795 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 BOLA1Q9Y3E2 137 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 HCN4Q9Y3Q4 1203 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 ZAR1LA6NP61 321 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 IQCF5A8MTL0 148 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NOS1APO75052 506 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 IFNA14P01570 189 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 HLA-DQB1P01920 261 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 ASMTP46597 345 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 SNRPGP62308 76 aaKnown RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 GPLD1P80108 840 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 EFR3AQ14156 821 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 ZNF77Q15935 545 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 TMEM201Q5SNT2 666 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 GPRC6AQ5T6X5 926 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 MACC1Q6ZN28 852 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 BPHLQ86WA6 291 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 SYT12Q8IV01 421 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 APCDD1Q8J025 514 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 FAM46DQ8NEK8 389 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 KLHL6Q8WZ60 621 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 AP2M1Q96CW1 435 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 MED18Q9BUE0 208 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 C12orf10Q9HB07 376 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 HHATLQ9HCP6 504 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 EXOSC4Q9NPD3 245 aaKnown RBP15.19■□□□□ 0.02
HMGA1-202ENST00000347617 FZD3Q9NPG1 666 aa15.19■□□□□ 0.02
HMGA1-202ENST00000347617 NDUFB11Q9NX14 153 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms