RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NELL2Q99435 816 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SLC12A9Q9BXP2 914 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 MCUBQ9NWR8 336 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 MAT2BQ9NZL9 334 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TEKT2Q9UIF3 430 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 STOML2Q9UJZ1 356 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 RPL36Q9Y3U8 105 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SNX11Q9Y5W9 270 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 KIAA1671Q9BY89 1806 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 WASHC1A8K0Z3 465 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 RNASET2O00584 256 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 INPPL1O15357 1258 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ORC5O43913 435 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 UGDHO60701 494 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CLDN11O75508 207 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SLC22A5O76082 557 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GADD45GO95257 159 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GASTP01350 101 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TRBC1P01850 177 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 PRKAR1AP10644 381 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 RHCEP18577 417 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 HK1P19367 917 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ASMTP46597 345 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 OR1E2P47887 323 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 MAN2A2P49641 1150 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 STK19P49842 368 aaPredicted RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 HNMTP50135 292 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 PCBP3P57721 371 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ABATP80404 500 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ARF5P84085 180 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ILKQ13418 452 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 C1DQ13901 141 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 OCLNQ16625 522 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TRIQKQ629K1 86 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 FAM205BPQ63HN1 556 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TRILQ7L0X0 811 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CHST9Q7L1S5 443 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ESX1Q8N693 406 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 PLA2G15Q8NCC3 412 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TTC16Q8NEE8 873 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 OR52N2Q8NGI0 321 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 WDR20Q8TBZ3 569 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 PIH1D2Q8WWB5 315 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 QRFPRQ96P65 431 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ZIC5Q96T25 663 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 KATNB1Q9BVA0 655 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ASB8Q9H765 288 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 TRIM45Q9H8W5 580 aaPredicted RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 DIMT1Q9UNQ2 313 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GABRR3A8MPY1 467 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 QSOX1O00391 747 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 LYRM1O43325 122 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 C8GP07360 202 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 RHOCP08134 193 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 GAAP10253 952 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SLC2A2P11168 524 aaPredicted RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 OSMP13725 252 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 HSD3B1P14060 373 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 POU2F1P14859 743 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 IDSP22304 550 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 HSD3B2P26439 372 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SDC2P34741 201 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 CPT1AP50416 773 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 MAPK12P53778 367 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PER3P56645 1201 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 MXD1Q05195 221 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TAF10Q12962 218 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SCARB2Q14108 478 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 MRPL58Q14197 206 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SF3A2Q15428 464 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 FLYWCH1Q4VC44 716 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 COX20Q5RI15 118 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 CPTPQ5TA50 214 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 LIPKQ5VXJ0 399 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 QSOX2Q6ZRP7 698 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 GLCCI1Q86VQ1 547 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 GHDCQ8N2G8 530 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM145Q8NBT3 493 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 VPS37AQ8NEZ2 397 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM163Q8TC26 289 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SLC16A10Q8TF71 515 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 AKAP1Q92667 903 aaKnown RBP eCLIP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 CXorf40BQ96DE9 158 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 MYO19Q96H55 970 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 KCTD7Q96MP8 289 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 NECTIN4Q96NY8 510 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TCF25Q9BQ70 676 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SYT17Q9BSW7 474 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM43Q9BTV4 400 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 C1QTNF7Q9BXJ2 289 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 ISYNA1Q9NPH2 558 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 IL26Q9NPH9 171 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 DNAJC11Q9NVH1 559 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 DNAJC27Q9NZQ0 273 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms