RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CNOT3O75175 753 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 EEDO75530 441 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 RSL1D1O76021 490 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 FHP07954 510 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 CYC1P08574 325 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM58BPP0C7Q3 252 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 CPN2P22792 545 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 ITPKBP27987 946 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 TMPRSS3P57727 454 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 RPS18P62269 152 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 KLC1Q07866 573 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 TBL3Q12788 808 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 ERV3-1Q14264 604 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 CRTC2Q53ET0 693 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF793Q6ZN11 406 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 ATG14Q6ZNE5 492 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 SHISA6Q6ZSJ9 500 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 MED25Q71SY5 747 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 COMMD6Q7Z4G1 85 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 RAB43Q86YS6 212 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 ZC3H7AQ8IWR0 971 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 C1orf52Q8N6N3 182 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM76AQ8TAV0 307 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 SPSB2Q99619 263 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 WDR41Q9HAD4 459 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 LRTM1Q9HBL6 345 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 PNPOQ9NVS9 261 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 C1orf109Q9NX04 203 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 SIRT5Q9NXA8 310 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 KCMF1Q9P0J7 381 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 VTI1BQ9UEU0 232 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 C3orf18Q9UK00 162 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 FBXW2Q9UKT8 454 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 MRPS18BQ9Y676 258 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 SPTBP11277 2137 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 A0A0A6YYD5 115 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 GNG14A0A1W2PPG7 69 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 CDC14CA4D256 554 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 IDSB3KWA1 339 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM227AF5H4B4 570 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PIP5K1BO14986 540 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 NKX2-8O15522 239 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PRMT3O60678 531 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 JRKO75564 520 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PRPH2P23942 346 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 MMP11P24347 488 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 OTX2P32243 289 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 BUD31P41223 144 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 HK2P52789 917 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 MAPK12P53778 367 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 TRA2BP62995 288 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 OCRLQ01968 901 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 SRSF6Q13247 344 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 NR6A1Q15406 480 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 UGT8Q16880 541 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 Q6ZSR9 355 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF595Q8IYB9 648 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PLPP5Q8NEB5 264 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 THAP4Q8WY91 577 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 APIPQ96GX9 242 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 MAPKAP1Q9BPZ7 522 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 TUBB1Q9H4B7 451 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 PRTFDC1Q9NRG1 225 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 MCM8Q9UJA3 840 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 WBP11Q9Y2W2 641 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 CCL27Q9Y4X3 112 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 ASB4Q9Y574 426 aa11.23□□□□□ -0.61
SPTLC1-202ENST00000337841 CEP295Q9C0D2 2601 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 SYNDIG1LA6NDD5 238 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TRPC5OSA6NMA1 111 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 NPIPB8E9PQR5 432 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 K7ENP7 123 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 CYR61O00622 381 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 HDAC3O15379 428 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PROM1O43490 865 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TMPRSS11DO60235 418 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 CTNSO60931 367 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ALOX12BO75342 701 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 VPS4BO75351 444 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 GBAP04062 536 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 UMODP07911 640 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ANXA4P09525 319 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 KITP10721 976 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TPP2P29144 1249 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 GSTM5P46439 218 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 HSD17B7P56937 341 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ACTN3Q08043 901 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 SLC13A2Q13183 592 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 BIKQ13323 160 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 NSDHLQ15738 373 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PDCD2Q16342 344 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms