RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RUNDC3AQ59EK9 446 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 LRIF1Q5T3J3 769 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MRM1Q6IN84 353 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 TMEM214Q6NUQ4 689 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 PRR23CQ6ZRP0 262 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 FAM181AQ8N9Y4 354 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 N4BP2L2Q92802 583 aaPredicted RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 AURKBQ96GD4 344 aaPredicted RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 SMIM10Q96HG1 83 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 CCDC115Q96NT0 180 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 FAIM2Q9BWQ8 316 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ROGDIQ9GZN7 287 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 IRAK4Q9NWZ3 460 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 NEUROG3Q9Y4Z2 214 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 KMT2EQ8IZD2 1858 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 A0A1W2PR48 441 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 GLOD5A6NK44 160 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 A8MU76 341 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 SRPX2O60687 465 aaPredicted RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 PRKRAO75569 313 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 ATP6V1G2O95670 118 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ABCB1P08183 1280 aaPredicted RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 PNLIPP16233 465 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ZNF10P21506 573 aaPredicted RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 CSF2RBP32927 897 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 SOX11P35716 441 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 LIPEQ05469 1076 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 FLOT2Q14254 428 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 PERM1Q5SV97 790 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 FAM47BQ8NA70 645 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 OR8J3Q8NGG0 315 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 OR4A15Q8NGL6 344 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 EXOSC8Q96B26 276 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 MAPKAP1Q9BPZ7 522 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ECSITQ9BQ95 431 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ALG2Q9H553 416 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 SUCOQ9UBS9 1254 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 BTNL2Q9UIR0 455 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 PCDHGB4Q9UN71 923 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ERVK-11Q9UQG0 969 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 PCDHGA5Q9Y5G8 931 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 RP1P56715 2156 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 UNC13CQ8NB66 2214 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 EME2A4GXA9 379 aaPredicted RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 WASHC1A8K0Z3 465 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 B3GALT2O43825 422 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 PCDHGA12O60330 932 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 DRD2P14416 443 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 IL1RNP18510 177 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 PTPN6P29350 595 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 GSK3BP49841 420 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 RIPK1Q13546 671 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 PRSS41Q7RTY9 318 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 STMN2Q93045 179 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 SERINC2Q96SA4 455 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 SH3GL1Q99961 368 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 NUDT22Q9BRQ3 303 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 LYARQ9NX58 379 aaKnown RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 ATXN7L1Q9ULK2 861 aaPredicted RBP13.93□□□□□ -0.18
CBX3-201ENST00000337620 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
CBX3-201ENST00000337620 NUP214P35658 2090 aaPredicted RBP13.92□□□□□ -0.18
CBX3-201ENST00000337620 SPEGQ15772 3267 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 TRBV5-3A0A0A0MS03 114 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 ZNF860A6NHJ4 632 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 SCELO95171 688 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 C6orf47O95873 294 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 DDX5P17844 614 aaKnown RBP13.92□□□□□ -0.18
CBX3-201ENST00000337620 EEFSECP57772 596 aaKnown RBP13.92□□□□□ -0.18
CBX3-201ENST00000337620 DAB2P98082 770 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 LRRC74AQ0VAA2 488 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 KCNAB1Q14722 419 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 C18orf63Q68DL7 685 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
CBX3-201ENST00000337620 KCTD14Q9BQ13 255 aaPredicted RBP13.92□□□□□ -0.18
CBX3-201ENST00000337620 IKZF5Q9H5V7 419 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 EGFL7Q9UHF1 273 aa13.92□□□□□ -0.18
CBX3-201ENST00000337620 TXNDC9O14530 226 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 PGRMC2O15173 223 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 PDPK1O15530 556 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 PROM1O43490 865 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 TBX19O60806 448 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 DNAJB6O75190 326 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 AIFM1O95831 613 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 HSD17B1P14061 328 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 HOXB9P17482 250 aaPredicted RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 HBA1P69905 142 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 OLR1P78380 273 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 CCL7P80098 99 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 HSD11B2P80365 405 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 CCNIQ14094 377 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 OR10A6Q8NH74 314 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 UTS2RQ9UKP6 389 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 NAALAD2Q9Y3Q0 740 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 SLC22A7Q9Y694 548 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms