RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PLD3Q8IV08 490 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 DNAJC22Q8N4W6 341 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 PHF10Q8WUB8 498 aaKnown RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 GTPBP3Q969Y2 492 aaKnown RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 AKIP1Q9NQ31 210 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 AHSPQ9NZD4 102 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 PSORS1C1Q9UIG5 152 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 PNMA8BQ9ULN7 279 aaPredicted RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 PCDHGA2Q9Y5H1 932 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 PLXND1Q9Y4D7 1925 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 TRBC2A0A5B9 178 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 SH3BP5O60239 455 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 TGFBR2P37173 567 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 P2RY2P41231 377 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 UBE2UQ5VVX9 321 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 TNFAIP8L2Q6P589 184 aaPredicted RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 TMC5Q6UXY8 1006 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 ARMC8Q8IUR7 673 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 SLC44A2Q8IWA5 706 aaPredicted RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 DYNC2LI1Q8TCX1 351 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 MYDGFQ969H8 173 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 ALOXE3Q9BYJ1 711 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 CUEDC1Q9NWM3 386 aaPredicted RBP16.9■□□□□ 0.3
LRCH3-201ENST00000334859 RHCGQ9UBD6 479 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
LRCH3-201ENST00000334859 NUP210Q8TEM1 1887 aaPredicted RBP16.89■□□□□ 0.3
LRCH3-201ENST00000334859 EFCAB9A8MZ26 197 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 C5orf58C9J3I9 102 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 PCDH17O14917 1159 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 GADD45GO95257 159 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 UQCRC2P22695 453 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 TGFBR1P36897 503 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 XCR1P46094 333 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 PCBP3P57721 371 aaKnown RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 TMEM52BQ4KMG9 183 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 KHDRBS2Q5VWX1 349 aaKnown RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 CEACAM20Q6UY09 585 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 ZNF605Q86T29 641 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 TAGAPQ8N103 731 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 S100ZQ8WXG8 99 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 SUSD6Q92537 303 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 FCGR1BQ92637 280 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 LGALS12Q96DT0 336 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 ZHX1-C8orf76Q96EF9 292 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 VMP1Q96GC9 406 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 F2RL3Q96RI0 385 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 EPS8L2Q9H6S3 715 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 GPR83Q9NYM4 423 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 DOLKQ9UPQ8 538 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 MUC22E2RYF6 1773 aaPredicted RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 KIF26AQ9ULI4 1882 aaPredicted RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 FUCA1P04066 466 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 IFNW1P05000 195 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 DDCP20711 480 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 FUT4P22083 530 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 PSMB5P28074 263 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 CLK1P49759 484 aaKnown RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 EIF4HQ15056 248 aaKnown RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 RPS26P11Q5JNZ5 115 aaPredicted RBP16.89■□□□□ 0.29
LRCH3-201ENST00000334859 FAM78AQ5JUQ0 283 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 EGFLAMQ63HQ2 1017 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 RHOXF1Q8NHV9 184 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 BADQ92934 168 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 AIF1LQ9BQI0 150 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 ABCG4Q9H172 646 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 ACER3Q9NUN7 267 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 C5AR2Q9P296 337 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 DAPK2Q9UIK4 370 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 DUSP12Q9UNI6 340 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 ENPP4Q9Y6X5 453 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 PMF1-BGLAPU3KQ54 211 aa16.89■□□□□ 0.29
LRCH3-201ENST00000334859 FEZF1A0PJY2 475 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 TBC1D3BA6NDS4 549 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 ANTXRLA6NF34 631 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 C1QTNF3-AMACRE9PGA6 284 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 BOLA2-SMG1P6H3BVE0 249 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 BCHEP06276 602 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 GRK3P35626 688 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 LIPAP38571 399 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 SLC19A1P41440 591 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 PXNP49023 591 aaPredicted RBP16.88■□□□□ 0.29
LRCH3-201ENST00000334859 MANFP55145 182 aaKnown RBP16.88■□□□□ 0.29
LRCH3-201ENST00000334859 CNTN1Q12860 1018 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 HSPB3Q12988 150 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 TBCEQ15813 527 aaPredicted RBP16.88■□□□□ 0.29
LRCH3-201ENST00000334859 GAB4Q2WGN9 574 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 PERM1Q5SV97 790 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 REEP3Q6NUK4 255 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 LRRTM4Q86VH4 590 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 ADGRF3Q8IZF5 1079 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 DEPDC4Q8N2C3 294 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 ANKRD53Q8N9V6 530 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 AQP11Q8NBQ7 271 aa16.88■□□□□ 0.29
LRCH3-201ENST00000334859 RNF217Q8TC41 542 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms